Gm11929 Pseudogene Detail

Summary

• Symbol
  Gm11929
• Name
  predicted gene 11929

• Feature Type
  pseudogene
• IDs
  MGI:3651490
  NCBI Gene: 665232
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:32207148-32208092 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 14.00 cM

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651490	pseudogene	Chr4:32207127-32208225 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012590	pseudogene	Chr4:29652134-29653077 (+)
A/J	MGP_AJ_G0012581	pseudogene	Chr4:28600885-28601828 (+)
AKR/J	MGP_AKRJ_G0012547	pseudogene	Chr4:29354241-29355184 (+)
BALB/cJ	MGP_BALBcJ_G0012567	pseudogene	Chr4:28843420-28844363 (+)
C3H/HeJ	MGP_C3HHeJ_G0012429	pseudogene	Chr4:29631179-29632243 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012883	pseudogene	Chr4:30832167-30833111 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011212	pseudogene	Chr4:26657216-26658158 (+)
CAST/EiJ	MGP_CASTEiJ_G0012184	pseudogene	Chr4:29391956-29392900 (+)
CBA/J	MGP_CBAJ_G0012407	pseudogene	Chr4:31799936-31800879 (+)
DBA/2J	MGP_DBA2J_G0012460	pseudogene	Chr4:28610636-28611579 (+)
FVB/NJ	MGP_FVBNJ_G0012464	pseudogene	Chr4:28031018-28031961 (+)
LP/J	MGP_LPJ_G0012534	pseudogene	Chr4:29742022-29742965 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012468	pseudogene	Chr4:34430714-34431657 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012883	pseudogene	Chr4:29339602-29340546 (+)
PWK/PhJ	MGP_PWKPhJ_G0012015	pseudogene	Chr4:28564368-28565312 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011834	pseudogene	Chr4:29210850-29211794 (+)
WSB/EiJ	MGP_WSBEiJ_G0012209	pseudogene	Chr4:29351262-29352206 (+)

Homology

• Gene Tree
  Gm11929
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Chemically and radiation induced
  1
• Genomic Mutations
  1 involving Gm11929
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083564 (Evidence)
• NCBI Gene
  665232

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083564	Ensembl Gene Model | MGI Sequence Detail	945	C57BL/6J
transcript	ENSMUST00000118175	Ensembl | MGI Sequence Detail	945	Not Applicable

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;