Gm13708 Gene Detail

Summary

• Symbol
  Gm13708
• Name
  predicted gene 13708

• Feature Type
  lncRNA gene
• IDs
  MGI:3651236
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:73290049-73307946 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 43.71 cM

Strain
Comparison

• SNPs within 2kb
  618 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651236	lncRNA gene	Chr2:73290049-73307946 (+)
129S1/SvImJ	ENSMUSG00200036975	lncRNA gene	Chr2:70358840-70376735 (+)
A/J	ENSMUSG00195023559	lncRNA gene	Chr2:70505439-70523338 (+)
AKR/J	ENSMUSG00220040791	lncRNA gene	Chr2:70470053-70487949 (+)
BALB/cJ	ENSMUSG00180042511	lncRNA gene	Chr2:70459207-70477108 (+)
C3H/HeJ	ENSMUSG00175037403	lncRNA gene	Chr2:70574147-70592044 (+)
C57BL/6NJ	ENSMUSG00215035130	lncRNA gene	Chr2:70401417-70419318 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005400	lincRNA gene	Chr2:68040952-68058802 (+)
CAST/EiJ	ENSTCUG00005009311	lncRNA gene	Chr2:69898494-69916386 (+)
CBA/J	ENSMUSG00210002469	lncRNA gene	Chr2:70616878-70634774 (+)
DBA/2J	ENSMUSG00185042580	lncRNA gene	Chr2:70452678-70470574 (+)
FVB/NJ	ENSMUSG00205038698	lncRNA gene	Chr2:69915476-69933373 (+)
JF1/MsJ	ENSUMUG00000006450	lncRNA gene	Chr2:70111849-70129693 (+)
LP/J	ENSMUSG00230026244	lncRNA gene	Chr2:72258535-72276431 (+)
NOD/ShiLtJ	ENSMUSG00190040710	lncRNA gene	Chr2:70538171-70556068 (+)
NZO/HlLtJ	ENSMUSG00225015299	lncRNA gene	Chr2:80002035-80019931 (+)
PWK/PhJ	ENSLUMG00010035549	lncRNA gene	Chr2:70349971-70367787 (+)
SPRET/EiJ	ENSMSPG00010023733	lncRNA gene	Chr2:71764282-71782256 (+)
WSB/EiJ	ENSIUOG00005020624	lncRNA gene	Chr2:70581293-70599200 (+)

Homology

• Gene Tree
  Gm13708
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  15 phenotype references
  

• All Mutations and Alleles
  7
• Chemically induced (other)
  1
• Targeted
  6
• Genomic Mutations
  7 involving Gm13708
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000086069 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086069	Ensembl Gene Model | MGI Sequence Detail	17898	C57BL/6J
transcript	ENSMUST00000145170	Ensembl | MGI Sequence Detail	390	Not Applicable

References

• Summaries
  All 20

  Phenotypes 15
• Earliest
  J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
• Latest
  J:373797 Hintermann A, et al., Co-option of an ancestral cloacal regulatory landscape during digit evolution. Nature. 2025 Sep 17;