Gm13597 Pseudogene Detail

Summary

• Symbol
  Gm13597
• Name
  predicted gene 13597

• Feature Type
  pseudogene
• IDs
  MGI:3651139
  NCBI Gene: 100039683
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:68384899-68385273 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 39.53 cM

Strain
Comparison

• SNPs within 2kb
  25 from dbSNP Build 142
• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651139	pseudogene	Chr2:68384846-68386094 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195022676	pseudogene	Chr2:65582072-65582446 (+)
A/J	ENSMUSG00195026846	pseudogene	Chr2:169403278-169403652 (-)
AKR/J	ENSMUSG00220038650	pseudogene	Chr2:168699037-168699411 (-)
AKR/J	ENSMUSG00220040526	pseudogene	Chr2:65549175-65549549 (+)
BALB/cJ	ENSMUSG00180042313	pseudogene	Chr2:65540938-65541312 (+)
C3H/HeJ	ENSMUSG00175039080	pseudogene	Chr2:65661954-65662328 (+)
C57BL/6NJ	ENSMUSG00215030824	pseudogene	Chr2:65480224-65480598 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009641	pseudogene	Chr11:67893361-67894202 (+)
CAST/EiJ	ENSTCUG00005009660	pseudogene	Chr2:64943143-64943347 (+)
CBA/J	ENSMUSG00210038033	pseudogene	Chr2:65702230-65702604 (+)
DBA/2J	ENSMUSG00185042083	pseudogene	Chr2:65540048-65540422 (+)
FVB/NJ	ENSMUSG00205037762	pseudogene	Chr2:65005713-65006087 (+)
JF1/MsJ	ENSUMUG00000006806	pseudogene	Chr2:65190740-65190888 (+)
LP/J	ENSMUSG00230023339	pseudogene	Chr2:67341721-67342095 (+)
LP/J	ENSMUSG00230014468	pseudogene	Chr2:170811463-170811837 (-)
NOD/ShiLtJ	ENSMUSG00190039554	pseudogene	Chr2:65625728-65626102 (+)
NZO/HlLtJ	ENSMUSG00225015476	pseudogene	Chr2:75078362-75078736 (+)
PWK/PhJ	ENSLUMG00010033596	pseudogene	Chr2:65384392-65384540 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005020438	pseudogene	Chr2:65673805-65674179 (+)

Homology

• Gene Tree
  Gm13597
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13597
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000075312 (Evidence)
• NCBI Gene
  100039683

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000075312	Ensembl Gene Model | MGI Sequence Detail	375	C57BL/6J
transcript	ENSMUST00000121239	Ensembl | MGI Sequence Detail	375	Not Applicable

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm13597:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr18023	Chr2:68384839-68384846 (+)	-56 bp