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Gm12909 Gene Detail
Summary
  • Symbol
    Gm12909
  • Name
    predicted gene 12909
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3651135
    NCBI Gene: 105243851
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:62006525-62008761 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 33.00 cM
Strain
Comparison
more
  • SNPs within 2kb
    39 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651135
 lncRNA gene Chr4:62006495-62016482 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003905
 antisense lncRNA gene Chr4:61051049-61053483 (+)
A/J MGP_AJ_G0003885
 antisense lncRNA gene Chr4:58829416-58831590 (+)
AKR/J MGP_AKRJ_G0003863
 antisense lncRNA gene Chr4:60543668-60548802 (+)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0003818
 antisense lncRNA gene Chr4:60972219-60974567 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004019
 antisense lncRNA gene Chr4:63148121-63150905 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0003811
 antisense lncRNA gene Chr4:65312382-65314808 (+)
DBA/2J MGP_DBA2J_G0003828
 antisense lncRNA gene Chr4:58719006-58724249 (+)
FVB/NJ MGP_FVBNJ_G0003846
 antisense lncRNA gene Chr4:57940730-57947590 (+)
LP/J MGP_LPJ_G0003907
 antisense lncRNA gene Chr4:61243583-61285146 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003834
 antisense lncRNA gene Chr4:68458008-68545265 (+)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    18
  • RefSeq
    4
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085404 Ensembl Gene Model | MGI Sequence Detail 2237 C57BL/6J ±  kb
transcript ENSMUST00000134190 Ensembl | MGI Sequence Detail 620 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 8
    Phenotypes 2
  • Earliest
    J:334686 Yang H, et al., Mup-knockout mice generated through CRISPR/Cas9-mediated deletion for use in urinary protein analysis. Acta Biochim Biophys Sin (Shanghai). 2016 May;48(5):468-73
  • Latest
    J:334590 Greve S, et al., The major urinary protein gene cluster knockout mouse as a novel model for translational metabolism research. Sci Rep. 2022 Aug 1;12(1):13161
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory