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Bach2it1 Gene Detail
Summary
  • Symbol
    Bach2it1
  • Name
    BTB and CNC homology 2, intronic transcript 1
  • Synonyms
    Gm11932
Location &
Maps
more
  • Sequence Map
    Chr4:32249367-32265839 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 14.02 cM
Strain
Comparison
more
  • SNPs within 2kb
    486 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651084
 sense intronic lncRNA gene Chr4:32249367-32265839 (+)
129S1/SvImJ ENSMUSG00200012925
 lncRNA gene Chr4:28951863-28965936 (+)
A/J ENSMUSG00195000232
 lncRNA gene Chr4:29471135-29485219 (+)
AKR/J ENSMUSG00220014652
 lncRNA gene Chr4:29263454-29277536 (+)
BALB/cJ ENSMUSG00180000306
 lncRNA gene Chr4:28974268-28988352 (+)
C3H/HeJ ENSMUSG00175002442
 lncRNA gene Chr4:29436176-29450256 (+)
C57BL/6NJ ENSMUSG00215001005
 lncRNA gene Chr4:29050830-29064911 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0034551
 sense intronic lncRNA gene Chr4:26702064-26716133 (+)
CAST/EiJ ENSTCUG00005000364
 lncRNA gene Chr4:28909324-28923415 (+)
CBA/J ENSMUSG00210004751
 lncRNA gene Chr4:29160819-29174903 (+)
DBA/2J ENSMUSG00185000364
 lncRNA gene Chr4:29233267-29247354 (+)
FVB/NJ ENSMUSG00205000549
 lncRNA gene Chr4:28818405-28832481 (+)
JF1/MsJ ENSUMUG00000002604
 lncRNA gene Chr4:29270973-29285320 (+)
LP/J ENSMUSG00230001206
 lncRNA gene Chr4:32522534-32536617 (+)
NOD/ShiLtJ ENSMUSG00190000591
 lncRNA gene Chr4:29157634-29171716 (+)
NZO/HlLtJ ENSMUSG00225008872
 lncRNA gene Chr4:36465620-36479691 (+)
PWK/PhJ ENSLUMG00010007678
 lncRNA gene Chr4:28719749-28734080 (+)
SPRET/EiJ ENSMSPG00010002491
 lncRNA gene Chr4:29547467-29561497 (+)
WSB/EiJ ENSIUOG00005005231
 lncRNA gene Chr4:28957812-28971887 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    24
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000087049 Ensembl Gene Model | MGI Sequence Detail 16473 C57BL/6J ±  kb
transcript ENSMUST00000133451 Ensembl | MGI Sequence Detail 481 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 11
    Phenotypes 1
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory