Gm13837 MGI Mouse Gene Detail - MGI:3650972

Sequence Map

Chr5:116395720-116396703 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650972	lncRNA gene	Chr5:116395720-116396703 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004155	antisense lncRNA gene	Chr5:119232692-119233610 (+)
A/J	MGP_AJ_G0004134	antisense lncRNA gene	Chr5:114441123-114442056 (+)
AKR/J	MGP_AKRJ_G0004115	antisense lncRNA gene	Chr5:118119780-118120713 (+)
BALB/cJ	MGP_BALBcJ_G0004120	antisense lncRNA gene	Chr5:115849773-115850681 (+)
C3H/HeJ	MGP_C3HHeJ_G0004069	antisense lncRNA gene	Chr5:118640117-118641055 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004269	antisense lncRNA gene	Chr5:123788358-123789276 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003745	antisense lncRNA gene	Chr5:109217450-109218472 (+)
CAST/EiJ	MGP_CASTEiJ_G0004030	antisense lncRNA gene	Chr5:117611017-117611935 (+)
CBA/J	MGP_CBAJ_G0004063	antisense lncRNA gene	Chr5:128550668-128551601 (+)
DBA/2J	MGP_DBA2J_G0004078	antisense lncRNA gene	Chr5:114533084-114533997 (+)
FVB/NJ	MGP_FVBNJ_G0004094	antisense lncRNA gene	Chr5:113368378-113369301 (+)
LP/J	MGP_LPJ_G0004156	antisense lncRNA gene	Chr5:119751703-119752673 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004084	antisense lncRNA gene	Chr5:132850891-132851819 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004266	antisense lncRNA gene	Chr5:117612850-117613768 (+)
PWK/PhJ	MGP_PWKPhJ_G0003984	antisense lncRNA gene	Chr5:113194484-113195387 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003927	antisense lncRNA gene	Chr5:115157940-115158827 (+)
WSB/EiJ	MGP_WSBEiJ_G0004067	antisense lncRNA gene	Chr5:118202208-118204274 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000086055	Ensembl Gene Model \| MGI Sequence Detail	984	C57BL/6J	± kb
	transcript	ENSMUST00000126326	Ensembl \| MGI Sequence Detail	337	Not Applicable

Summaries

All 10

Phenotypes 5
Earliest

J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
Latest

J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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