Gm13791 Gene Detail

Summary

• Symbol
  Gm13791
• Name
  predicted gene 13791

• Feature Type
  lncRNA gene
• IDs
  MGI:3650954
  NCBI Gene: 102634512
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:92686512-92744008 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 51.37 cM

Strain
Comparison

• SNPs within 2kb
  508 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650954	lncRNA gene	Chr2:92643291-92745439 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015445	unclassified non-coding RNA gene	Chr2:94330141-94389190 (-)
A/J	MGP_AJ_G0015421	unclassified non-coding RNA gene	Chr2:90492547-90550004 (-)
AKR/J	MGP_AKRJ_G0015385	unclassified non-coding RNA gene	Chr2:93018424-93078118 (-)
BALB/cJ	MGP_BALBcJ_G0015384	unclassified non-coding RNA gene	Chr2:90685657-90744465 (-)
C3H/HeJ	MGP_C3HHeJ_G0015207	unclassified non-coding RNA gene	Chr2:93299371-93361844 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015838	unclassified non-coding RNA gene	Chr2:97546930-97606039 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013577	unclassified non-coding RNA gene	Chr2:86987721-87046274 (-)
CAST/EiJ	MGP_CASTEiJ_G0014759	unclassified non-coding RNA gene	Chr2:93877827-93937775 (-)
CBA/J	MGP_CBAJ_G0015188	unclassified non-coding RNA gene	Chr2:100937240-101001586 (-)
DBA/2J	MGP_DBA2J_G0015282	unclassified non-coding RNA gene	Chr2:90104952-90163228 (-)
FVB/NJ	MGP_FVBNJ_G0015289	unclassified non-coding RNA gene	Chr2:89199760-89257242 (-)
LP/J	MGP_LPJ_G0015360	unclassified non-coding RNA gene	Chr2:94519398-94578558 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015313	unclassified non-coding RNA gene	Chr2:103894358-103955263 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015878	unclassified non-coding RNA gene	Chr2:93093166-93151500 (-)
PWK/PhJ	MGP_PWKPhJ_G0014547	unclassified non-coding RNA gene	Chr2:89845067-89902165 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014335	unclassified non-coding RNA gene	Chr2:92679924-92731433 (-)
WSB/EiJ	MGP_WSBEiJ_G0014866	unclassified non-coding RNA gene	Chr2:93713289-93773350 (-)

Homology

• Gene Tree
  Gm13791
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Radiation induced
  1
• Targeted
  2
• Genomic Mutations
  4 involving Gm13791
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  9

• Ensembl
  ENSMUSG00000086980 (Evidence)
• NCBI Gene
  102634512

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086980	Ensembl Gene Model | MGI Sequence Detail	57497	C57BL/6J
transcript	ENSMUST00000123263	Ensembl | MGI Sequence Detail	608	Not Applicable

References

• Summaries
  All 12

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5:e16087