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Gm13842 Gene Detail
Summary
  • Symbol
    Gm13842
  • Name
    predicted gene 13842
Location &
Maps
more
  • Sequence Map
    Chr5:116164470-116167300 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 56.10 cM
Strain
Comparison
more
  • SNPs within 2kb
    211 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650892
 lncRNA gene Chr5:116164343-116167741 (-)
129S1/SvImJ ENSMUSG00200023754
 lncRNA gene Chr5:109905281-109908091 (-)
A/J ENSMUSG00195041360
 lncRNA gene Chr5:109425566-109428378 (-)
AKR/J ENSMUSG00220052016
 lncRNA gene Chr5:108935031-108937843 (-)
BALB/cJ ENSMUSG00180047943
 lncRNA gene Chr5:109556059-109558870 (-)
C3H/HeJ ENSMUSG00175048927
 lncRNA gene Chr5:111543348-111546167 (-)
C57BL/6NJ ENSMUSG00215039541
 lncRNA gene Chr5:109565919-109568739 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006163
 lincRNA gene Chr5:108980803-108983706 (-)
CAST/EiJ ENSTCUG00005034124
 lncRNA gene Chr5:108747119-108749946 (-)
CBA/J ENSMUSG00210047573
 lncRNA gene Chr5:110294387-110297206 (-)
DBA/2J ENSMUSG00185054194
 lncRNA gene Chr5:113354297-113357107 (-)
FVB/NJ ENSMUSG00205053134
 lncRNA gene Chr5:109194722-109197533 (-)
JF1/MsJ ENSUMUG00000054221
 lncRNA gene Chr5:116178034-116180930 (-)
LP/J ENSMUSG00230049175
 lncRNA gene Chr5:117443416-117446227 (-)
NOD/ShiLtJ ENSMUSG00190049446
 lncRNA gene Chr5:109230110-109232920 (-)
NZO/HlLtJ ENSMUSG00225016131
 lncRNA gene Chr5:125103705-125106516 (-)
PWK/PhJ ENSLUMG00010041660
 lncRNA gene Chr5:108071352-108074255 (-)
SPRET/EiJ ENSMSPG00010045061
 lncRNA gene Chr5:111363346-111366224 (-)
WSB/EiJ ENSIUOG00005047012
 lncRNA gene Chr5:111935952-111938762 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm13842
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    44
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 115490207 NCBI Gene Model | MGI Sequence Detail 2831 C57BL/6J ±  kb
transcript NR_165275 RefSeq | MGI Sequence Detail 1160 ZRU/MplStud  
For the selected sequence
References
more
  • Summaries
    All 11
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory