Gm12167 MGI Mouse Gene Detail - MGI:3650837

Sequence Map

Chr11:46233114-46235847 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650837	lncRNA gene	Chr11:46232983-46235993 (+)
129S1/SvImJ	ENSMUSG00200040698	lncRNA gene	Chr11:43300477-43303208 (+)
A/J	ENSMUSG00195036347	lncRNA gene	Chr11:43244539-43247270 (+)
AKR/J	ENSMUSG00220041673	lncRNA gene	Chr11:43429360-43432052 (+)
BALB/cJ	ENSMUSG00180038425	lncRNA gene	Chr11:43234333-43237060 (+)
C3H/HeJ	ENSMUSG00175038607	lncRNA gene	Chr11:43237945-43240676 (+)
C57BL/6NJ	ENSMUSG00215038852	lncRNA gene	Chr11:43182328-43185061 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002594	antisense lncRNA gene	Chr11:41498209-41500906 (+)
CAST/EiJ	ENSTCUG00005043943	lncRNA gene	Chr11:42976760-42979485 (+)
CBA/J	ENSMUSG00210030511	lncRNA gene	Chr11:43127830-43130559 (+)
DBA/2J	ENSMUSG00185027976	lncRNA gene	Chr11:43303974-43306703 (+)
FVB/NJ	ENSMUSG00205039283	lncRNA gene	Chr11:43237932-43240634 (+)
JF1/MsJ	ENSUMUG00000042356	lncRNA gene	Chr11:43570162-43572853 (+)
LP/J	ENSMUSG00230034006	lncRNA gene	Chr11:44454216-44456945 (+)
NOD/ShiLtJ	ENSMUSG00190041604	lncRNA gene	Chr11:43344461-43347190 (+)
NZO/HlLtJ	ENSMUSG00225036509	lncRNA gene	Chr11:46402738-46405480 (+)
PWK/PhJ	ENSLUMG00010034082	lncRNA gene	Chr11:43126434-43129193 (+)
SPRET/EiJ	ENSMSPG00010021282	lncRNA gene	Chr11:43750811-43753470 (+)
WSB/EiJ	ENSIUOG00005040358	lncRNA gene	Chr11:43126502-43129233 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	100503965	NCBI Gene Model \| MGI Sequence Detail	2734	C57BL/6J	± kb
	transcript	NR_152253	RefSeq \| MGI Sequence Detail	595	ZRU/MplStud

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Summaries

All 15

Phenotypes 5
Earliest

J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
Latest

J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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