Gm12848 Pseudogene Detail

Summary

• Symbol
  Gm12848
• Name
  predicted gene 12848

• Feature Type
  pseudogene
• IDs
  MGI:3650820
  NCBI Gene: 546843
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:115509838-115510738 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 53.06 cM

Strain
Comparison

• SNPs within 2kb
  124 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650820	pseudogene	Chr4:115509586-115510738 (+)
129S1/SvImJ	ENSMUSG00200050034	pseudogene	Chr4:109398958-109400049 (+)
A/J	ENSMUSG00195048035	pseudogene	Chr4:110653778-110654869 (+)
AKR/J	ENSMUSG00220012862	pseudogene	Chr4:110017896-110018987 (+)
BALB/cJ	ENSMUSG00180048088	pseudogene	Chr4:108744686-108745777 (+)
C3H/HeJ	ENSMUSG00175043631	pseudogene	Chr4:109759140-109760231 (+)
C57BL/6NJ	ENSMUSG00215033154	pseudogene	Chr4:110832652-110833743 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011393	pseudogene	Chr4:106143866-106144709 (+)
CAST/EiJ	ENSTCUG00005022703	pseudogene	Chr4:109535126-109536218 (+)
CBA/J	ENSMUSG00210053477	pseudogene	Chr4:109372655-109373746 (+)
DBA/2J	ENSMUSG00185050722	pseudogene	Chr4:110885680-110886771 (+)
FVB/NJ	ENSMUSG00205043510	pseudogene	Chr4:108841992-108843083 (+)
JF1/MsJ	ENSUMUG00000048846	pseudogene	Chr4:110799011-110800102 (+)
LP/J	ENSMUSG00230046121	pseudogene	Chr4:114216288-114217379 (+)
NOD/ShiLtJ	ENSMUSG00190049005	pseudogene	Chr4:108742079-108743170 (+)
NZO/HlLtJ	ENSMUSG00225011605	pseudogene	Chr4:119703679-119704770 (+)
PWK/PhJ	ENSLUMG00010048336	pseudogene	Chr4:108205863-108206954 (+)
SPRET/EiJ	ENSMSPG00010030198	pseudogene	Chr4:110274177-110275269 (+)
WSB/EiJ	ENSIUOG00005044610	pseudogene	Chr4:109055481-109056572 (+)

Homology

• Gene Tree
  Gm12848
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm12848
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000082043 (Evidence)
• NCBI Gene
  546843

Representative Sequences			Length	Strain/Species
genomic	546843	NCBI Gene Model | MGI Sequence Detail	901	C57BL/6J
transcript	KY467436	GenBank | ENA | DDBJ | MGI Sequence Detail	842	ZRU/MplStud

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm12848:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr38463	Chr4:115509516-115509517 (+)	-321 bp