Gm12735 Gene Detail

Summary

• Symbol
  Gm12735
• Name
  predicted gene 12735

• Feature Type
  lncRNA gene
• IDs
  MGI:3650816
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:3143516-3144263 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 2.23 cM

Strain
Comparison

• SNPs within 2kb
  68 from dbSNP Build 142
• Strain Annotations
  24

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650816	lncRNA gene	Chr11:3143516-3144263 (-)
129S1/SvImJ	ENSMUSG00200035113	lncRNA gene	Chr11:96436-97183 (-)
A/J	ENSMUSG00195024673	lncRNA gene	Chr11:3804-4551 (-)
AKR/J	ENSMUSG00220009273	lncRNA gene	Chr11:16981-17728 (-)
BALB/cJ	ENSMUSG00180029680	lncRNA gene	Chr11:26845-27592 (-)
C3H/HeJ	ENSMUSG00175010223	lncRNA gene	Chr11:16617-17364 (-)
C57BL/6NJ	ENSMUSG00215034207	lncRNA gene	Chr11:26980-27728 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039176	lncRNA gene	Chr11:112513-113260 (-)
CBA/J	ENSMUSG00210018453	lncRNA gene	Chr11:16372-17119 (-)
DBA/2J	ENSMUSG00185019294	lncRNA gene	Chr11:113975-114722 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000046247	lncRNA gene	Chr11:258762-259509 (-)
LP/J	ENSMUSG00230036128	lncRNA gene	Chr11:1179679-1180426 (-)
LP/J	ENSMUSG00230003917	lncRNA gene	Chr2:1427363-1428110 (-)
LP/J	ENSMUSG00230007366	lncRNA gene	Chr14:429579-430326 (-)
NOD/ShiLtJ	ENSMUSG00190043215	lncRNA gene	Chr11:3738-4485 (-)
NZO/HlLtJ	ENSMUSG00225035153	lncRNA gene	Chr15:1830572-1831319 (+)
NZO/HlLtJ	ENSMUSG00225026359	lncRNA gene	Chr11:3236653-3237400 (-)
NZO/HlLtJ	ENSMUSG00225000050	lncRNA gene	Chr2:2918898-2919645 (+)
NZO/HlLtJ	ENSMUSG00225006723	lncRNA gene	Chr5:71102-71850 (-)
NZO/HlLtJ	ENSMUSG00225026473	lncRNA gene	Chr11:36070-36817 (-)
NZO/HlLtJ	ENSMUSG00225000278	lncRNA gene	Chr1:1060002-1060749 (+)
PWK/PhJ	ENSLUMG00010019200	lncRNA gene	Chr11:4279-5026 (-)
SPRET/EiJ	ENSMSPG00010008690	lncRNA gene	Chr11:88153-88898 (-)
WSB/EiJ	ENSIUOG00005007557	lncRNA gene	Chr11:17672-18419 (-)

Homology

• Gene Tree
  Gm12735
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  4 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26

• Ensembl
  ENSMUSG00000086049 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086049	Ensembl Gene Model | MGI Sequence Detail	748	C57BL/6J
transcript	ENSMUST00000146218	Ensembl | MGI Sequence Detail	651	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;