Gm11809 Pseudogene Detail

Summary

• Symbol
  Gm11809
• Name
  predicted gene 11809

• Feature Type
  pseudogene
• IDs
  MGI:3650709
  NCBI Gene: 666760
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:8672633-8673582 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 3.67 cM

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650709	pseudogene	Chr4:8672435-8673582 (-)
129S1/SvImJ	ENSMUSG00200001454	pseudogene	Chr4:5282976-5283925 (-)
A/J	ENSMUSG00195002837	pseudogene	Chr4:5699860-5700809 (-)
AKR/J	ENSMUSG00220001395	pseudogene	Chr4:5486330-5487279 (-)
BALB/cJ	ENSMUSG00180004596	pseudogene	Chr4:5268513-5269462 (-)
C3H/HeJ	ENSMUSG00175017383	pseudogene	Chr4:5791119-5792068 (-)
C57BL/6NJ	ENSMUSG00215004579	pseudogene	Chr4:5413432-5414381 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026217	pseudogene	Chr4:5510463-5511411 (-)
CBA/J	ENSMUSG00210002650	pseudogene	Chr4:5532073-5533022 (-)
DBA/2J	ENSMUSG00185002659	pseudogene	Chr4:5651474-5652423 (-)
FVB/NJ	ENSMUSG00205003696	pseudogene	Chr4:5302536-5303485 (-)
JF1/MsJ	ENSUMUG00000002842	pseudogene	Chr4:5744190-5745131 (-)
LP/J	ENSMUSG00230008604	pseudogene	Chr4:8818655-8819604 (-)
NOD/ShiLtJ	ENSMUSG00190014366	pseudogene	Chr4:5350855-5351804 (-)
NZO/HlLtJ	ENSMUSG00225008406	pseudogene	Chr4:12825144-12826093 (-)
PWK/PhJ	ENSLUMG00010005808	pseudogene	Chr4:5238443-5239384 (-)
SPRET/EiJ	ENSMSPG00010003050	pseudogene	Chr4:5555048-5555998 (-)
WSB/EiJ	ENSIUOG00005014548	pseudogene	Chr4:5298414-5299363 (-)

Homology

• Gene Tree
  Gm11809
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082122 (Evidence)
• NCBI Gene
  666760

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082122	Ensembl Gene Model | MGI Sequence Detail	950	C57BL/6J
transcript	ENSMUST00000120923	Ensembl | MGI Sequence Detail	950	Not Applicable

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm11809:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr40889	Chr4:8673720-8673729 (-)	-143 bp