Gm13750 Pseudogene Detail

Summary

• Symbol
  Gm13750
• Name
  predicted gene 13750

• Feature Type
  pseudogene
• IDs
  MGI:3650598
  NCBI Gene: 241074
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:64189360-64189824 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 32.52 cM

Strain
Comparison

• SNPs within 2kb
  76 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650598	pseudogene	Chr1:64189288-64190009 (+)
129S1/SvImJ	ENSMUSG00200004947	pseudogene	Chr1:61699623-61700087 (+)
A/J	ENSMUSG00195031672	pseudogene	Chr1:61221961-61222425 (+)
AKR/J	ENSMUSG00220040074	pseudogene	Chr1:61331961-61332425 (+)
BALB/cJ	ENSMUSG00180031477	pseudogene	Chr1:61517600-61518064 (+)
C3H/HeJ	ENSMUSG00175000867	pseudogene	Chr1:61615772-61616236 (+)
C57BL/6NJ	ENSMUSG00215023585	pseudogene	Chr1:61543324-61543788 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009146	pseudogene	Chr1:58134374-58134834 (+)
CAST/EiJ	ENSTCUG00005021843	pseudogene	Chr1:61363100-61363564 (+)
CBA/J	ENSMUSG00210003222	pseudogene	Chr1:61300929-61301393 (+)
DBA/2J	ENSMUSG00185005100	pseudogene	Chr1:62417853-62418317 (+)
FVB/NJ	ENSMUSG00205015742	pseudogene	Chr1:61247731-61248194 (+)
JF1/MsJ	ENSUMUG00000004807	pseudogene	Chr1:61350052-61350516 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190014142	pseudogene	Chr1:61478796-61479260 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010007589	pseudogene	Chr1:60896543-60897007 (+)
SPRET/EiJ	ENSMSPG00010020151	pseudogene	Chr1:62873077-62873541 (+)
WSB/EiJ	ENSIUOG00005029987	pseudogene	Chr1:61094667-61095131 (+)

Homology

• Gene Tree
  Gm13750
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm13750
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000086721 (Evidence)
• NCBI Gene
  241074

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086721	Ensembl Gene Model | MGI Sequence Detail	465	C57BL/6J
transcript	ENSMUST00000117621	Ensembl | MGI Sequence Detail	465	Not Applicable

References

• Summaries
  All 10

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm13750:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr7081	Chr1:64189284-64189285 (+)	-75 bp