Mir217hg Gene Detail

Summary

• Symbol
  Mir217hg
• Name
  microRNA 217 host gene
• Synonyms
  Gm12082

• Feature Type
  lncRNA gene
• IDs
  MGI:3650549
  NCBI Gene: 102637282
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:28680633-28722168 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 16.23 cM

Strain
Comparison

• SNPs within 2kb
  297 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650549	lncRNA gene	Chr11:28680633-28765767 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005196	lincRNA gene	Chr11:26736115-26807421 (+)
A/J	MGP_AJ_G0005181	lincRNA gene	Chr11:25770286-25833027 (+)
AKR/J	MGP_AKRJ_G0005159	lincRNA gene	Chr11:26589020-26663708 (+)
BALB/cJ	MGP_BALBcJ_G0005161	lincRNA gene	Chr11:25927011-25998420 (+)
C3H/HeJ	MGP_C3HHeJ_G0005110	lincRNA gene	Chr11:26529932-26588868 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005313	lincRNA gene	Chr11:27720605-27786770 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004710	lincRNA gene	Chr11:24441168-24501342 (+)
CAST/EiJ	MGP_CASTEiJ_G0005057	lincRNA gene	Chr11:26573117-26632897 (+)
CBA/J	MGP_CBAJ_G0005100	lincRNA gene	Chr11:28983292-29052054 (+)
DBA/2J	MGP_DBA2J_G0005117	lincRNA gene	Chr11:25618441-25677491 (+)
FVB/NJ	MGP_FVBNJ_G0005142	lincRNA gene	Chr11:25423405-25484343 (+)
LP/J	MGP_LPJ_G0005198	lincRNA gene	Chr11:26998643-27065050 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005125	lincRNA gene	Chr11:30001636-30076728 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005316	lincRNA gene	Chr11:26729549-26801438 (+)
PWK/PhJ	MGP_PWKPhJ_G0005008	lincRNA gene	Chr11:25723783-25786567 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004931	lincRNA gene	Chr11:26412702-26476326 (+)
WSB/EiJ	MGP_WSBEiJ_G0005105	lincRNA gene	Chr11:26403104-26470700 (+)

Homology

• Gene Tree
  Mir217hg
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  6
• Chemically induced (other)
  1
• Endonuclease-mediated
  5
• Genomic Mutations
  6 involving Mir217hg
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000085510 (Evidence)
• NCBI Gene
  102637282

Representative Sequences			Length	Strain/Species
genomic	102637282	NCBI Gene Model | MGI Sequence Detail	41536	C57BL/6J
transcript	XR_381119	RefSeq | MGI Sequence Detail	2425	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:278847 Sutaria DS, et al., Knockout of Acinar Enriched microRNAs in Mice Promote Duct Formation But Not Pancreatic Cancer. Sci Rep. 2019 Jul 31;9(1):11147

TSS for Mir217hg:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr100684	Chr11:28680472-28680482 (+)	-156 bp