Rps15a-ps7 Pseudogene Detail

Summary

• Symbol
  Rps15a-ps7
• Name
  ribosomal protein S15A, pseudogene 7
• Synonyms
  Gm14166

• Feature Type
  pseudogene
• IDs
  MGI:3650538
  NCBI Gene: 100043843
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:152027211-152027602 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 74.83 cM

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650538	pseudogene	Chr2:152027175-152027619 (-)
129S1/SvImJ	ENSMUSG00200031352	pseudogene	Chr2:148930354-148930745 (-)
A/J	ENSMUSG00195021664	pseudogene	Chr2:149212124-149212515 (-)
AKR/J	ENSMUSG00220047049	pseudogene	Chr2:148535643-148536034 (-)
BALB/cJ	ENSMUSG00180045000	pseudogene	Chr2:148697176-148697567 (-)
C3H/HeJ	ENSMUSG00175047364	pseudogene	Chr2:149443379-149443770 (-)
C57BL/6NJ	ENSMUSG00215036618	pseudogene	Chr2:148870363-148870754 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043952	pseudogene	Chr2:147799857-147800248 (-)
CBA/J	ENSMUSG00210046505	pseudogene	Chr2:149379903-149380294 (-)
DBA/2J	ENSMUSG00185049901	pseudogene	Chr2:149030371-149030762 (-)
FVB/NJ	ENSMUSG00205038912	pseudogene	Chr2:148127106-148127497 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230037164	pseudogene	Chr2:150682781-150683172 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225005903	pseudogene	Chr2:158718513-158718904 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005048703	pseudogene	Chr2:148547689-148548080 (-)

Homology

• Gene Tree
  Rps15a-ps7
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Rps15a-ps7
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000081087 (Evidence)
• NCBI Gene
  100043843

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081087	Ensembl Gene Model | MGI Sequence Detail	392	C57BL/6J
transcript	ENSMUST00000117430	Ensembl | MGI Sequence Detail	392	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Rps15a-ps7:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr26783	Chr2:152027623-152027634 (-)	-27 bp