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Cnbd1 Gene Detail
Summary
  • Symbol
    Cnbd1
  • Name
    cyclic nucleotide binding domain containing 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:3650508
    NCBI Gene: 435772
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:18767980-19122550 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 7.28 cM
Strain
Comparison
more
  • SNPs within 2kb
    1260 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650508
 protein coding gene Chr4:18767980-19122565 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028078
 protein coding gene Chr4:15860688-16147734 (-)
A/J MGP_AJ_G0028036
 protein coding gene Chr4:15403247-15672082 (-)
AKR/J MGP_AKRJ_G0028001
 protein coding gene Chr4:15720723-16016877 (-)
BALB/cJ MGP_BALBcJ_G0028047
 protein coding gene Chr4:15368355-15636705 (-)
C3H/HeJ MGP_C3HHeJ_G0027777
 protein coding gene Chr4:15845903-16127897 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028490
 protein coding gene Chr4:16509998-16789221 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025832
 protein coding gene Chr4:14287614-14539756 (-)
CAST/EiJ MGP_CASTEiJ_G0027232
 protein coding gene Chr4:15649117-15928836 (-)
CBA/J MGP_CBAJ_G0027750
 protein coding gene Chr4:16957358-17263850 (-)
DBA/2J MGP_DBA2J_G0027893
 protein coding gene Chr4:15195942-15467557 (-)
FVB/NJ MGP_FVBNJ_G0027859
 protein coding gene Chr4:14954969-15223060 (-)
LP/J MGP_LPJ_G0028002
 protein coding gene Chr4:15886568-16188001 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027892
 protein coding gene Chr4:17892854-18218118 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028549
 protein coding gene Chr4:15627216-15912420 (-)
PWK/PhJ MGP_PWKPhJ_G0026952
 protein coding gene Chr4:15141879-15404039 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026781
 protein coding gene Chr4:15505693-15786140 (-)
WSB/EiJ MGP_WSBEiJ_G0027309
 protein coding gene Chr4:15723364-15992880 (-)



Homology
more
  • Human Ortholog
    CNBD1, cyclic nucleotide binding domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CNBD1, cyclic nucleotide binding domain containing 1
  • Links
    NCBI Gene ID: 168975
    neXtProt AC: NX_Q8NA66
    UniProt: Q8NA66

  • Chr Location
    8q21.3; chr8:86866415-87615219 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    2
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 435772 NCBI Gene Model | MGI Sequence Detail 354571 C57BL/6J ±  kb
transcript NM_001371269 RefSeq | MGI Sequence Detail 1644 C57BL/6  
polypeptide NP_001358198 RefSeq | MGI Sequence Detail 514 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR000595 Cyclic nucleotide-binding domain
    IPR043533 Cyclic nucleotide-binding domain-containing protein 1/2
    IPR018490 Cyclic nucleotide-binding domain superfamily
    IPR014710 RmlC-like jelly roll fold
References
more
  • Summaries
    All 14
    Phenotypes 6
  • Earliest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory