Uqcrh-ps2 Pseudogene Detail

Summary

• Symbol
  Uqcrh-ps2
• Name
  ubiquinol-cytochrome c reductase hinge protein, pseudogene 2
• Synonyms
  Gm14088

• Feature Type
  pseudogene
• IDs
  MGI:3650492
  NCBI Gene: 102636129
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:118838690-118838958 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 59.81 cM

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650492	pseudogene	Chr2:118838636-118839142 (+)
129S1/SvImJ	ENSMUSG00200048470	pseudogene	Chr2:115778437-115778705 (+)
A/J	ENSMUSG00195025271	pseudogene	Chr2:115826690-115826958 (+)
AKR/J	ENSMUSG00220043356	pseudogene	Chr2:115704843-115705111 (+)
BALB/cJ	ENSMUSG00180044173	pseudogene	Chr2:115631796-115632064 (+)
C3H/HeJ	ENSMUSG00175028082	pseudogene	Chr2:116092148-116092416 (+)
C57BL/6NJ	ENSMUSG00215033132	pseudogene	Chr2:115755480-115755748 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010596	pseudogene	Chr2:111830720-111830988 (+)
CAST/EiJ	ENSTCUG00005017143	pseudogene	Chr2:115030106-115030374 (+)
CBA/J	ENSMUSG00210007576	pseudogene	Chr2:115933119-115933387 (+)
DBA/2J	ENSMUSG00185048753	pseudogene	Chr2:115628491-115628759 (+)
FVB/NJ	ENSMUSG00205042669	pseudogene	Chr2:114843175-114843443 (+)
JF1/MsJ	ENSUMUG00000041190	pseudogene	Chr2:115494097-115494367 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190047392	pseudogene	Chr2:115861425-115861693 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010048792	pseudogene	Chr2:115402582-115402850 (+)
SPRET/EiJ	ENSMSPG00010044300	pseudogene	Chr2:117808708-117808967 (+)
WSB/EiJ	ENSIUOG00005029245	pseudogene	Chr2:115592783-115593051 (+)

Homology

• Gene Tree
  Uqcrh-ps2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Uqcrh-ps2
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000081413 (Evidence)
• NCBI Gene
  102636129

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081413	Ensembl Gene Model | MGI Sequence Detail	269	C57BL/6J
transcript	ENSMUST00000121613	Ensembl | MGI Sequence Detail	269	Not Applicable

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Uqcrh-ps2:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr19596	Chr2:118838613-118838630 (+)	-68 bp