Rpl36-ps8 Pseudogene Detail

Summary

• Symbol
  Rpl36-ps8
• Name
  ribosomal protein L36, pseudogene 8
• Synonyms
  Gm12995

• Feature Type
  pseudogene
• IDs
  MGI:3650480
  NCBI Gene: 625336
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:116697104-116697418 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 53.36 cM

Strain
Comparison

• SNPs within 2kb
  27 from dbSNP Build 142
• Strain Annotations
  9

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650480	pseudogene	Chr4:116697077-116697441 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012834	pseudogene	Chr4:117776666-117777300 (-)
A/J	no annotation
AKR/J	MGP_AKRJ_G0012790	pseudogene	Chr4:115707938-115708289 (-)
BALB/cJ	MGP_BALBcJ_G0012800	pseudogene	Chr4:113873430-113874071 (-)
C3H/HeJ	MGP_C3HHeJ_G0012657	pseudogene	Chr4:117274486-117274825 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013136	pseudogene	Chr4:122313607-122314239 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0012634	pseudogene	Chr4:125646468-125646782 (-)
DBA/2J	MGP_DBA2J_G0012695	pseudogene	Chr4:113880998-113881629 (-)
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0013147	pseudogene	Chr4:116851268-116851834 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Rpl36-ps8
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Rpl36-ps8
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  13
• RefSeq
  1

• Ensembl
  ENSMUSG00000075390 (Evidence)
• NCBI Gene
  625336

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000075390	Ensembl Gene Model | MGI Sequence Detail	315	C57BL/6J
transcript	ENSMUST00000121187	Ensembl | MGI Sequence Detail	315	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;