Rpsa-ps9 Pseudogene Detail

Summary

• Symbol
  Rpsa-ps9
• Name
  ribosomal protein SA, pseudogene 9
• Synonyms
  Gm13374

• Feature Type
  pseudogene
• IDs
  MGI:3650393
  NCBI Gene: 665412
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:28367178-28368062 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 19.38 cM

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  24

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650393	pseudogene	Chr2:28367103-28368129 (+)
129S1/SvImJ	ENSMUSG00200053330	pseudogene	Chr2:25335287-25336172 (+)
129S1/SvImJ	ENSMUSG00200015437	pseudogene	Chr19:57968584-57969469 (+)
A/J	ENSMUSG00195051361	pseudogene	Chr2:25429969-25430853 (+)
AKR/J	ENSMUSG00220053631	pseudogene	Chr2:25547692-25548576 (+)
BALB/cJ	ENSMUSG00180054494	pseudogene	Chr2:25448948-25449832 (+)
BALB/cJ	ENSMUSG00180020569	pseudogene	Chr19:58391503-58392388 (+)
C3H/HeJ	ENSMUSG00175053676	pseudogene	Chr2:25418207-25419091 (+)
C3H/HeJ	ENSMUSG00175023306	pseudogene	Chr19:57932408-57933293 (+)
C57BL/6NJ	ENSMUSG00215050324	pseudogene	Chr2:25476981-25477865 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053542	pseudogene	Chr2:25164377-25165261 (+)
CBA/J	ENSMUSG00210017735	pseudogene	Chr2:25451799-25452683 (+)
DBA/2J	ENSMUSG00185053463	pseudogene	Chr2:25343878-25344762 (+)
DBA/2J	ENSMUSG00185028966	pseudogene	Chr19:58508289-58509174 (+)
FVB/NJ	ENSMUSG00205003964	pseudogene	Chr19:57395895-57396780 (+)
FVB/NJ	ENSMUSG00205051867	pseudogene	Chr2:25195687-25196571 (+)
JF1/MsJ	ENSUMUG00000056719	pseudogene	Chr2:25254157-25254178 (+)
LP/J	ENSMUSG00230028567	pseudogene	Chr19:59250862-59251747 (+)
LP/J	ENSMUSG00230045499	pseudogene	Chr2:27271175-27272060 (+)
NOD/ShiLtJ	ENSMUSG00190053321	pseudogene	Chr2:25450699-25451583 (+)
NOD/ShiLtJ	ENSMUSG00190007781	pseudogene	Chr5:71416367-71417252 (+)
NZO/HlLtJ	ENSMUSG00225011053	pseudogene	Chr2:35020801-35021685 (+)
PWK/PhJ	ENSLUMG00010053017	pseudogene	Chr2:25331737-25331758 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005052639	pseudogene	Chr2:25303855-25304740 (+)

Homology

• Gene Tree
  Rpsa-ps9
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1

• Ensembl
  ENSMUSG00000082895 (Evidence)
• NCBI Gene
  665412

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082895	Ensembl Gene Model | MGI Sequence Detail	885	C57BL/6J
transcript	ENSMUST00000120702	Ensembl | MGI Sequence Detail	885	Not Applicable

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Rpsa-ps9:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr16932	Chr2:28367095-28367105 (+)	-78 bp