Gm12089 MGI Mouse Gene Detail - MGI:3650341

Sequence Map

Chr11:29465086-29467355 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650341	lncRNA gene	Chr11:29465086-29467355 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002931	antisense lncRNA gene	Chr11:27519814-27524783 (+)
A/J	MGP_AJ_G0002908	antisense lncRNA gene	Chr11:26508400-26510674 (+)
AKR/J	MGP_AKRJ_G0002889	antisense lncRNA gene	Chr11:27371237-27373511 (+)
BALB/cJ	MGP_BALBcJ_G0002896	antisense lncRNA gene	Chr11:26712549-26714772 (+)
C3H/HeJ	MGP_C3HHeJ_G0002851	antisense lncRNA gene	Chr11:27281352-27283626 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003038	antisense lncRNA gene	Chr11:28465935-28468173 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002580	antisense lncRNA gene	Chr11:25152243-25154575 (+)
CAST/EiJ	MGP_CASTEiJ_G0002823	antisense lncRNA gene	Chr11:27340973-27343201 (+)
CBA/J	MGP_CBAJ_G0002848	antisense lncRNA gene	Chr11:29809318-29811542 (+)
DBA/2J	MGP_DBA2J_G0002855	antisense lncRNA gene	Chr11:26368105-26370379 (+)
FVB/NJ	MGP_FVBNJ_G0002874	antisense lncRNA gene	Chr11:26167304-26169646 (+)
LP/J	MGP_LPJ_G0002930	antisense lncRNA gene	Chr11:27779576-27781844 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002862	antisense lncRNA gene	Chr11:30898478-30900752 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003041	antisense lncRNA gene	Chr11:27467767-27470033 (+)
PWK/PhJ	MGP_PWKPhJ_G0002781	antisense lncRNA gene	Chr11:26459876-26462295 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002730	antisense lncRNA gene	Chr11:27157380-27159686 (+)
WSB/EiJ	MGP_WSBEiJ_G0002852	antisense lncRNA gene	Chr11:27171632-27175172 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000085165	Ensembl Gene Model \| MGI Sequence Detail	2270	C57BL/6J	± kb
	transcript	ENSMUST00000138402	Ensembl \| MGI Sequence Detail	428	Not Applicable

Summaries

All 10

Phenotypes 5
Earliest

J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
Latest

J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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