Gm12502 Pseudogene Detail

Summary

• Symbol
  Gm12502
• Name
  predicted gene 12502

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3650307
  NCBI Gene: 102640327
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:107927201-107927644 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 46.83 cM

Strain
Comparison

• SNPs within 2kb
  160 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650307	pseudogene	Chr3:107927201-107927725 (+)
129S1/SvImJ	ENSMUSG00200036179	pseudogene	Chr3:104543175-104543618 (+)
A/J	ENSMUSG00195026351	pseudogene	Chr3:104969611-104970054 (+)
AKR/J	ENSMUSG00220033292	pseudogene	Chr3:103333236-103333679 (+)
BALB/cJ	ENSMUSG00180018845	pseudogene	Chr3:104914403-104914846 (+)
C3H/HeJ	ENSMUSG00175032107	pseudogene	Chr3:104449731-104450174 (+)
C57BL/6NJ	ENSMUSG00215030826	pseudogene	Chr3:105177596-105178039 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005027663	pseudogene	Chr3:105448551-105448994 (+)
CBA/J	ENSMUSG00210008589	pseudogene	Chr3:105071591-105072034 (+)
DBA/2J	ENSMUSG00185022741	pseudogene	Chr3:105540926-105541369 (+)
FVB/NJ	ENSMUSG00205032446	pseudogene	Chr3:104107592-104108035 (+)
JF1/MsJ	ENSUMUG00000005499	pseudogene	Chr3:104516811-104517254 (+)
LP/J	ENSMUSG00230021025	pseudogene	Chr3:107456180-107456623 (+)
NOD/ShiLtJ	ENSMUSG00190040101	pseudogene	Chr3:105779010-105779453 (+)
NZO/HlLtJ	ENSMUSG00225021578	pseudogene	Chr3:109962372-109962815 (+)
PWK/PhJ	ENSLUMG00010025378	pseudogene	Chr3:104379983-104380429 (+)
SPRET/EiJ	ENSMSPG00010035789	pseudogene	Chr3:104881057-104881505 (+)
WSB/EiJ	ENSIUOG00005005008	pseudogene	Chr3:105093494-105093937 (+)

Homology

• Gene Tree
  Gm12502
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Targeted
  1
• Genomic Mutations
  2 involving Gm12502
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000083627 (Evidence)
• NCBI Gene
  102640327

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083627	Ensembl Gene Model | MGI Sequence Detail	444	C57BL/6J
transcript	ENSMUST00000120197	Ensembl | MGI Sequence Detail	444	Not Applicable
polypeptide	XP_036019400	RefSeq | MGI Sequence Detail	105	C57BL/6J

References

• Summaries
  All 10

  Phenotypes 4
• Earliest
  J:286217 Xiang Z, et al., Mice lacking three Loci encoding 14 glutathione transferase genes: a novel tool for assigning function to the GSTP, GSTM, and GSTT families. Drug Metab Dispos. 2014 Jun;42(6):1074-83
• Latest
  J:281737 Behrens KA, et al., Beyond detoxification: Pleiotropic functions of multiple glutathione S-transferase isoforms protect mice against a toxic electrophile. PLoS One. 2019;14(11):e0225449