Gm14000 Pseudogene Detail

Summary

• Symbol
  Gm14000
• Name
  predicted gene 14000

• Feature Type
  pseudogene
• IDs
  MGI:3650179
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:121235722-121235954 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 60.38 cM

Strain
Comparison

• SNPs within 2kb
  46 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650179	pseudogene	Chr2:121235722-121235954 (+)
129S1/SvImJ	ENSMUSG00200048791	pseudogene	Chr2:118165910-118166142 (+)
A/J	ENSMUSG00195025562	pseudogene	Chr2:118207483-118207715 (+)
AKR/J	ENSMUSG00220044095	pseudogene	Chr2:118130478-118130710 (+)
BALB/cJ	ENSMUSG00180045640	pseudogene	Chr2:118008119-118008351 (+)
C3H/HeJ	ENSMUSG00175027416	pseudogene	Chr2:118482233-118482465 (+)
C57BL/6NJ	ENSMUSG00215032297	pseudogene	Chr2:118154055-118154287 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010600	pseudogene	Chr2:114264421-114264654 (+)
CAST/EiJ	ENSTCUG00005017243	pseudogene	Chr2:117417175-117417407 (+)
CBA/J	ENSMUSG00210007569	pseudogene	Chr2:118323104-118323336 (+)
DBA/2J	ENSMUSG00185048621	pseudogene	Chr2:118005415-118005647 (+)
FVB/NJ	ENSMUSG00205043003	pseudogene	Chr2:117230892-117231124 (+)
JF1/MsJ	ENSUMUG00000043694	pseudogene	Chr2:117902228-117902460 (+)
LP/J	ENSMUSG00230023989	pseudogene	Chr2:119825510-119825742 (+)
NOD/ShiLtJ	ENSMUSG00190047473	pseudogene	Chr2:118251171-118251403 (+)
NZO/HlLtJ	ENSMUSG00225004889	pseudogene	Chr2:127729760-127729992 (+)
PWK/PhJ	ENSLUMG00010048053	pseudogene	Chr2:117794318-117794550 (+)
SPRET/EiJ	ENSMSPG00010044362	pseudogene	Chr2:120235319-120235551 (+)
WSB/EiJ	ENSIUOG00005029684	pseudogene	Chr2:117978948-117979180 (+)

Homology

• Gene Tree
  Gm14000
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm14000
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000084140 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084140	Ensembl Gene Model | MGI Sequence Detail	233	C57BL/6J
transcript	ENSMUST00000118670	Ensembl | MGI Sequence Detail	233	Not Applicable

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Gm14000:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr623	Chr2:121235627-121235628 (+)	-94 bp