Gm11836 Pseudogene Detail

Summary

• Symbol
  Gm11836
• Name
  predicted gene 11836

• Feature Type
  pseudogene
• IDs
  MGI:3650063
  NCBI Gene: 433688
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:14433891-14434331 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 6.21 cM

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650063	pseudogene	Chr4:14433848-14434481 (+)
129S1/SvImJ	ENSMUSG00200001267	pseudogene	Chr4:11081494-11081934 (+)
A/J	ENSMUSG00195017286	pseudogene	Chr4:11521782-11522222 (+)
AKR/J	ENSMUSG00220001352	pseudogene	Chr4:11266651-11267091 (+)
BALB/cJ	ENSMUSG00180001973	pseudogene	Chr4:11029202-11029642 (+)
C3H/HeJ	ENSMUSG00175018617	pseudogene	Chr4:11548749-11549189 (+)
C57BL/6NJ	ENSMUSG00215011305	pseudogene	Chr4:11185079-11185519 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016669	pseudogene	Chr4:11209729-11210178 (+)
CBA/J	ENSMUSG00210001757	pseudogene	Chr4:11286464-11286904 (+)
DBA/2J	ENSMUSG00185001249	pseudogene	Chr4:11396698-11397138 (+)
FVB/NJ	ENSMUSG00205002081	pseudogene	Chr4:10945114-10945554 (+)
JF1/MsJ	ENSUMUG00000002104	pseudogene	Chr4:11446214-11446655 (+)
LP/J	ENSMUSG00230001412	pseudogene	Chr4:14578441-14578881 (+)
NOD/ShiLtJ	ENSMUSG00190026409	pseudogene	Chr4:11143356-11143796 (+)
NZO/HlLtJ	ENSMUSG00225008672	pseudogene	Chr4:18571257-18571697 (+)
PWK/PhJ	ENSLUMG00010001928	pseudogene	Chr4:10900716-10901157 (+)
SPRET/EiJ	ENSMSPG00010013716	pseudogene	Chr4:11340751-11341191 (+)
WSB/EiJ	ENSIUOG00005008717	pseudogene	Chr4:10946338-10946778 (+)

Homology

• Gene Tree
  Gm11836
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081239 (Evidence)
• NCBI Gene
  433688

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081239	Ensembl Gene Model | MGI Sequence Detail	441	C57BL/6J
transcript	ENSMUST00000121022	Ensembl | MGI Sequence Detail	441	Not Applicable

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm11836:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr36535	Chr4:14433842-14433848 (+)	-46 bp