Gm11970 Pseudogene Detail

Summary

• Symbol
  Gm11970
• Name
  predicted gene 11970

• Feature Type
  pseudogene
• IDs
  MGI:3650056
  NCBI Gene: 102640218
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:6396218-6396537 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 4.08 cM

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650056	pseudogene	Chr11:6395819-6396633 (+)
129S1/SvImJ	ENSMUSG00200034745	pseudogene	Chr11:3338150-3338469 (+)
A/J	ENSMUSG00195024436	pseudogene	Chr11:3261329-3261648 (+)
AKR/J	ENSMUSG00220009522	pseudogene	Chr11:3290651-3290970 (+)
BALB/cJ	ENSMUSG00180028233	pseudogene	Chr11:3286595-3286914 (+)
C3H/HeJ	ENSMUSG00175010785	pseudogene	Chr11:3264525-3264844 (+)
C57BL/6NJ	ENSMUSG00215033558	pseudogene	Chr11:3285570-3285889 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040916	pseudogene	Chr11:3349768-3350087 (+)
CBA/J	ENSMUSG00210018535	pseudogene	Chr11:3274565-3274884 (+)
DBA/2J	ENSMUSG00185019242	pseudogene	Chr11:3372349-3372668 (+)
FVB/NJ	ENSMUSG00205037922	pseudogene	Chr11:3245564-3245883 (+)
JF1/MsJ	ENSUMUG00000047729	pseudogene	Chr11:3516322-3516641 (+)
LP/J	ENSMUSG00230034903	pseudogene	Chr11:4438844-4439163 (+)
NOD/ShiLtJ	ENSMUSG00190040081	pseudogene	Chr11:3253826-3254145 (+)
NZO/HlLtJ	ENSMUSG00225026088	pseudogene	Chr11:6477213-6477532 (+)
PWK/PhJ	ENSLUMG00010019663	pseudogene	Chr11:3265322-3265641 (+)
SPRET/EiJ	ENSMSPG00010009258	pseudogene	Chr11:3322330-3322650 (+)
WSB/EiJ	ENSIUOG00005007612	pseudogene	Chr11:3277392-3277711 (+)

Homology

• Gene Tree
  Gm11970
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000079988 (Evidence)
• NCBI Gene
  102640218

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000079988	Ensembl Gene Model | MGI Sequence Detail	320	C57BL/6J
transcript	ENSMUST00000116105	Ensembl | MGI Sequence Detail	320	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm11970:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr100256	Chr11:6396174-6396195 (+)	-33 bp