Gm14176 Pseudogene Detail

Summary

• Symbol
  Gm14176
• Name
  predicted gene 14176

• Feature Type
  pseudogene
• IDs
  MGI:3650021
  NCBI Gene: 100043681
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:157743456-157743932 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 78.45 cM

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650021	pseudogene	Chr2:157743372-157744448 (+)
129S1/SvImJ	ENSMUSG00200017623	pseudogene	Chr2:154605502-154605978 (+)
A/J	ENSMUSG00195002511	pseudogene	Chr18:22111151-22111627 (+)
A/J	ENSMUSG00195022569	pseudogene	Chr2:154973510-154973986 (+)
AKR/J	ENSMUSG00220014458	pseudogene	Chr2:154304138-154304614 (+)
BALB/cJ	ENSMUSG00180050512	pseudogene	Chr2:154428154-154428630 (+)
C3H/HeJ	ENSMUSG00175024832	pseudogene	Chr18:22075038-22075514 (+)
C3H/HeJ	ENSMUSG00175051384	pseudogene	Chr2:155178317-155178793 (+)
C57BL/6NJ	ENSMUSG00215038401	pseudogene	Chr2:154593032-154593508 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210016340	pseudogene	Chr18:22102109-22102585 (+)
CBA/J	ENSMUSG00210017361	pseudogene	Chr2:155109421-155109897 (+)
DBA/2J	ENSMUSG00185023465	pseudogene	Chr18:22050128-22050604 (+)
DBA/2J	ENSMUSG00185049776	pseudogene	Chr2:154828454-154828930 (+)
FVB/NJ	ENSMUSG00205044547	pseudogene	Chr2:153860511-153860987 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230046610	pseudogene	Chr2:156403066-156403542 (+)
NOD/ShiLtJ	ENSMUSG00190047467	pseudogene	Chr2:154503425-154503901 (+)
NOD/ShiLtJ	ENSMUSG00190007205	pseudogene	Chr18:21861852-21862328 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005047254	pseudogene	Chr2:154195652-154196128 (+)

Homology

• Gene Tree
  Gm14176
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000062846 (Evidence)
• NCBI Gene
  100043681

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000062846	Ensembl Gene Model | MGI Sequence Detail	477	C57BL/6J
transcript	ENSMUST00000121302	Ensembl | MGI Sequence Detail	477	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm14176:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr21293	Chr2:157743368-157743397 (+)	-73 bp