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Gm11788 Gene Detail
Summary
  • Symbol
    Gm11788
  • Name
    predicted gene 11788
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3649943
    NCBI Gene: 102640850
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:120380232-120383220 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 84.19 cM
Strain
Comparison
more
  • SNPs within 2kb
    31 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649943
 lncRNA gene Chr11:120380232-120383220 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003116
 antisense lncRNA gene Chr11:124958587-124961576 (-)
A/J MGP_AJ_G0003093
 antisense lncRNA gene Chr11:119397746-119400735 (-)
AKR/J MGP_AKRJ_G0003074
 antisense lncRNA gene Chr11:122990552-122993541 (-)
BALB/cJ MGP_BALBcJ_G0003080
 antisense lncRNA gene Chr11:119753365-119756354 (-)
C3H/HeJ MGP_C3HHeJ_G0003036
 antisense lncRNA gene Chr11:123326191-123329180 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003223
 antisense lncRNA gene Chr11:128736052-128739041 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002757
 antisense lncRNA gene Chr11:116385722-116388759 (-)
CAST/EiJ MGP_CASTEiJ_G0003005
 antisense lncRNA gene Chr11:124815545-124818516 (-)
CBA/J MGP_CBAJ_G0003033
 antisense lncRNA gene Chr11:133775862-133778851 (-)
DBA/2J MGP_DBA2J_G0003038
 antisense lncRNA gene Chr11:118766650-118769639 (-)
FVB/NJ MGP_FVBNJ_G0003058
 antisense lncRNA gene Chr11:118476821-118479810 (-)
LP/J MGP_LPJ_G0003113
 antisense lncRNA gene Chr11:125260013-125263002 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003047
 antisense lncRNA gene Chr11:132617867-132620856 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003227
 antisense lncRNA gene Chr11:123676325-123679314 (-)
PWK/PhJ MGP_PWKPhJ_G0002963
 antisense lncRNA gene Chr11:120200255-120203226 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002907
 antisense lncRNA gene Chr11:123438060-123441024 (-)
WSB/EiJ MGP_WSBEiJ_G0003036
 antisense lncRNA gene Chr11:123667754-123670745 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086929 Ensembl Gene Model | MGI Sequence Detail 2989 C57BL/6J ±  kb
transcript ENSMUST00000142520 Ensembl | MGI Sequence Detail 562 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory