Gm13375 Gene Detail

Summary

• Symbol
  Gm13375
• Name
  predicted gene 13375

• Feature Type
  lncRNA gene
• IDs
  MGI:3649913
  NCBI Gene: 433408
• Alliance
  genome feature page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr2:20973685-20975159 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 14.68 cM

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  28

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649913	lncRNA gene	Chr2:20967216-20980573 (+)
129S1/SvImJ	ENSMUSG00200041528	protein coding gene	Chr2:17926386-17928084 (+)
129S1/SvImJ	ENSMUSG00200042141	lncRNA gene	Chr2:17926710-17928045 (+)
A/J	ENSMUSG00195019087	lncRNA gene	Chr2:18066582-18067912 (+)
AKR/J	ENSMUSG00220014110	lncRNA gene	Chr2:18187580-18188910 (+)
BALB/cJ	ENSMUSG00180036566	protein coding gene	Chr2:18043974-18051909 (+)
BALB/cJ	ENSMUSG00180037707	lncRNA gene	Chr2:18050532-18051870 (+)
C3H/HeJ	ENSMUSG00175022384	protein coding gene	Chr2:18009301-18017189 (+)
C3H/HeJ	ENSMUSG00175022850	lncRNA gene	Chr2:18015861-18017196 (+)
C57BL/6NJ	ENSMUSG00215034024	lncRNA gene	Chr2:18100825-18102160 (+)
C57BL/6NJ	ENSMUSG00215025338	protein coding gene	Chr2:18094268-18102199 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003134	antisense lncRNA gene	Chr2:17311508-17312482 (+)
CAST/EiJ	ENSTCUG00005004533	lncRNA gene	Chr2:17840966-17842301 (+)
CBA/J	ENSMUSG00210003620	protein coding gene	Chr2:18047348-18055234 (+)
CBA/J	ENSMUSG00210004126	lncRNA gene	Chr2:18053906-18055241 (+)
DBA/2J	ENSMUSG00185039402	lncRNA gene	Chr2:17981077-17982407 (+)
FVB/NJ	ENSMUSG00205010420	protein coding gene	Chr2:17983742-17991673 (+)
FVB/NJ	ENSMUSG00205015002	lncRNA gene	Chr2:17990299-17991634 (+)
JF1/MsJ	ENSUMUG00000004801	lncRNA gene	Chr2:17899333-17900696 (+)
LP/J	ENSMUSG00230020330	lncRNA gene	Chr2:19886235-19887570 (+)
LP/J	ENSMUSG00230016513	protein coding gene	Chr2:19879678-19887563 (+)
NOD/ShiLtJ	ENSMUSG00190012459	protein coding gene	Chr2:18033763-18035461 (+)
NOD/ShiLtJ	ENSMUSG00190014694	lncRNA gene	Chr2:18034087-18035422 (+)
NZO/HlLtJ	ENSMUSG00225001108	protein coding gene	Chr2:27630215-27638100 (+)
NZO/HlLtJ	ENSMUSG00225001740	lncRNA gene	Chr2:27636772-27638107 (+)
PWK/PhJ	ENSLUMG00010035245	lncRNA gene	Chr2:17996685-17998019 (+)
SPRET/EiJ	ENSMSPG00010015506	lncRNA gene	Chr2:18525217-18526552 (+)
WSB/EiJ	ENSIUOG00005015722	lncRNA gene	Chr2:18088058-18089392 (+)

Homology

• Gene Tree
  Gm13375
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  7

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  40
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000075514 (Evidence)
• NCBI Gene
  433408

Representative Sequences			Length	Strain/Species
genomic	433408	NCBI Gene Model | MGI Sequence Detail	1475	C57BL/6J
transcript	NR_033225	RefSeq | MGI Sequence Detail	1385	C57BL/6
polypeptide	Q3TYJ6	UniProt | EBI | MGI Sequence Detail	104	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 7

  cDNA 7

References

• Summaries
  All 11
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm13375:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr16461	Chr2:20973476-20973508 (+)	-193 bp
Tssr16462	Chr2:20973513-20973526 (+)	-165 bp
Tssr16463	Chr2:20973542-20973555 (+)	-136 bp
Tssr16464	Chr2:20973879-20973908 (+)	209 bp
Tssr16465	Chr2:20975065-20975068 (+)	1,382 bp