Gm14024 Gene Detail

Summary

• Symbol
  Gm14024
• Name
  predicted gene 14024

• Feature Type
  lncRNA gene
• IDs
  MGI:3649704
  NCBI Gene: 671466
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:129088296-129110743 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 62.84 cM

Strain
Comparison

• SNPs within 2kb
  748 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649704	lncRNA gene	Chr2:129088296-129110743 (+)
129S1/SvImJ	ENSMUSG00200049101	lncRNA gene	Chr2:126131083-126152878 (+)
A/J	ENSMUSG00195031131	lncRNA gene	Chr2:126162639-126184797 (+)
AKR/J	ENSMUSG00220044982	lncRNA gene	Chr2:125925037-125946618 (+)
BALB/cJ	ENSMUSG00180050655	lncRNA gene	Chr2:125965027-125986904 (+)
C3H/HeJ	ENSMUSG00175046416	lncRNA gene	Chr2:126504023-126525748 (+)
C57BL/6NJ	ENSMUSG00215037412	lncRNA gene	Chr2:126010850-126033002 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003253	antisense lncRNA gene	Chr2:122075602-122098330 (+)
CAST/EiJ	ENSTCUG00005040379	lncRNA gene	Chr2:125302509-125323508 (+)
CBA/J	ENSMUSG00210035269	lncRNA gene	Chr2:126360851-126382665 (+)
DBA/2J	ENSMUSG00185035660	lncRNA gene	Chr2:126016400-126037429 (+)
FVB/NJ	ENSMUSG00205044355	lncRNA gene	Chr2:125179445-125201239 (+)
JF1/MsJ	ENSUMUG00000030394	lncRNA gene	Chr2:125855348-125876348 (+)
LP/J	ENSMUSG00230039409	lncRNA gene	Chr2:127766361-127788156 (+)
NOD/ShiLtJ	ENSMUSG00190015628	lncRNA gene	Chr2:126115912-126137688 (+)
NZO/HlLtJ	ENSMUSG00225027772	lncRNA gene	Chr2:135675204-135696970 (+)
PWK/PhJ	ENSLUMG00010042117	lncRNA gene	Chr2:125774288-125795312 (+)
SPRET/EiJ	ENSMSPG00010034071	lncRNA gene	Chr2:128162774-128192713 (+)
WSB/EiJ	ENSIUOG00005046099	lncRNA gene	Chr2:125938748-125960546 (+)

Homology

• Gene Tree
  Gm14024
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  8
• Chemically induced (other)
  1
• Gene trapped
  6
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm14024
• Find Mice (IMSR)
  20 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000085485 (Evidence)
• NCBI Gene
  671466

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085485	Ensembl Gene Model | MGI Sequence Detail	22448	C57BL/6J
transcript	ENSMUST00000141964	Ensembl | MGI Sequence Detail	560	Not Applicable

References

• Summaries
  All 11

  Phenotypes 5
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm14024:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr20109	Chr2:129088277-129088281 (+)	-17 bp