Gm13381 Gene Detail

Summary

• Symbol
  Gm13381
• Name
  predicted gene 13381

• Feature Type
  lncRNA gene
• IDs
  MGI:3649650
• Alliance
  genome feature page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr2:28452209-28466710 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 19.38 cM

Strain
Comparison

• SNPs within 2kb
  413 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649650	lncRNA gene	Chr2:28452209-28466710 (+)
129S1/SvImJ	ENSMUSG00200053603	lncRNA gene	Chr2:25422191-25436737 (+)
A/J	ENSMUSG00195050181	lncRNA gene	Chr2:25515015-25529522 (+)
AKR/J	ENSMUSG00220053637	lncRNA gene	Chr2:25632753-25647258 (+)
BALB/cJ	ENSMUSG00180054518	lncRNA gene	Chr2:25534001-25548503 (+)
C3H/HeJ	ENSMUSG00175053925	lncRNA gene	Chr2:25503247-25517751 (+)
C57BL/6NJ	ENSMUSG00215049551	lncRNA gene	Chr2:25562021-25576523 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003149	antisense lncRNA gene	Chr2:24428208-24443129 (+)
CAST/EiJ	ENSTCUG00005053562	lncRNA gene	Chr2:25247143-25261452 (+)
CBA/J	ENSMUSG00210018171	lncRNA gene	Chr2:25536836-25551339 (+)
DBA/2J	ENSMUSG00185053202	lncRNA gene	Chr2:25428923-25443429 (+)
FVB/NJ	ENSMUSG00205051889	lncRNA gene	Chr2:25280728-25295233 (+)
JF1/MsJ	ENSUMUG00000056476	lncRNA gene	Chr2:25331633-25346059 (+)
LP/J	ENSMUSG00230045380	lncRNA gene	Chr2:27358066-27372618 (+)
NOD/ShiLtJ	ENSMUSG00190053087	lncRNA gene	Chr2:25535741-25550241 (+)
NZO/HlLtJ	ENSMUSG00225010955	lncRNA gene	Chr2:35105842-35120348 (+)
PWK/PhJ	ENSLUMG00010053067	lncRNA gene	Chr2:25409504-25424003 (+)
SPRET/EiJ	ENSMSPG00010047458	lncRNA gene	Chr2:26138681-26153286 (+)
WSB/EiJ	ENSIUOG00005053056	lncRNA gene	Chr2:25388854-25403367 (+)

Homology

• Gene Tree
  Gm13381
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000087667 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087667	Ensembl Gene Model | MGI Sequence Detail	14502	C57BL/6J
transcript	ENSMUST00000177012	Ensembl | MGI Sequence Detail	640	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm13381:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr16963	Chr2:28450566-28450611 (+)	-1,620 bp
Tssr16964	Chr2:28450960-28450975 (+)	-1,241 bp
Tssr16965	Chr2:28452521-28452539 (+)	321 bp