Gm11899 MGI Mouse Gene Detail - MGI:3649624

Sequence Map

Chr4:24792553-24801543 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649624	lncRNA gene	Chr4:24792553-24801543 (+)
129S1/SvImJ	ENSMUSG00200012870	lncRNA gene	Chr4:21505875-21513490 (+)
A/J	ENSMUSG00195000265	lncRNA gene	Chr4:21980234-21987849 (+)
AKR/J	ENSMUSG00220014794	lncRNA gene	Chr4:21730130-21737744 (+)
BALB/cJ	ENSMUSG00180000356	lncRNA gene	Chr4:21452311-21459926 (+)
C3H/HeJ	ENSMUSG00175002388	lncRNA gene	Chr4:21960056-21967686 (+)
C57BL/6NJ	ENSMUSG00215000858	lncRNA gene	Chr4:21577422-21585052 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003489	antisense lncRNA gene	Chr4:19735466-19743125 (+)
CAST/EiJ	ENSTCUG00005000468	lncRNA gene	Chr4:21449615-21457237 (+)
CBA/J	ENSMUSG00210004933	lncRNA gene	Chr4:21684180-21691810 (+)
DBA/2J	ENSMUSG00185000415	lncRNA gene	Chr4:21775745-21783375 (+)
FVB/NJ	ENSMUSG00205000574	lncRNA gene	Chr4:21257344-21264958 (+)
JF1/MsJ	ENSUMUG00000002889	lncRNA gene	Chr4:21713137-21720768 (+)
LP/J	ENSMUSG00230000693	lncRNA gene	Chr4:25039623-25047295 (+)
NOD/ShiLtJ	ENSMUSG00190000642	lncRNA gene	Chr4:21675673-21683288 (+)
NZO/HlLtJ	ENSMUSG00225002092	lncRNA gene	Chr4:28981498-28989112 (+)
PWK/PhJ	ENSLUMG00010007905	lncRNA gene	Chr4:21162290-21169930 (+)
SPRET/EiJ	ENSMSPG00010002743	lncRNA gene	Chr4:21832040-21839699 (+)
WSB/EiJ	ENSIUOG00005005470	lncRNA gene	Chr4:21420062-21427705 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000087399	Ensembl Gene Model \| MGI Sequence Detail	8991	C57BL/6J	± kb
	transcript	ENSMUST00000142373	Ensembl \| MGI Sequence Detail	2067	Not Applicable

Summaries

All 5
Earliest

J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
Latest

J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm11899:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr36639	Chr4:24799894-24799895 (+)	7,342 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 09/15/2026 MGI 6.29