Glo1-ps Pseudogene Detail

Summary

• Symbol
  Glo1-ps
• Name
  glyoxalase 1, pseudogene
• Synonyms
  Gm13443

• Feature Type
  pseudogene
• IDs
  MGI:3649615
  NCBI Gene: 654354
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:35230421-35230975 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 23.55 cM

Strain
Comparison

• SNPs within 2kb
  58 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649615	pseudogene	Chr2:35230350-35230999 (+)
129S1/SvImJ	ENSMUSG00200048169	pseudogene	Chr2:32210092-32210646 (+)
A/J	ENSMUSG00195042338	pseudogene	Chr2:32312130-32312684 (+)
AKR/J	ENSMUSG00220044643	pseudogene	Chr2:32427062-32427616 (+)
BALB/cJ	ENSMUSG00180049430	pseudogene	Chr2:32326509-32327063 (+)
C3H/HeJ	ENSMUSG00175045839	pseudogene	Chr2:32292843-32293397 (+)
C57BL/6NJ	ENSMUSG00215047151	pseudogene	Chr2:32359973-32360527 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017853	pseudogene	Chr2:32024465-32025019 (+)
CBA/J	ENSMUSG00210049761	pseudogene	Chr2:32365163-32365717 (+)
DBA/2J	ENSMUSG00185048713	pseudogene	Chr2:32225005-32225559 (+)
FVB/NJ	ENSMUSG00205040385	pseudogene	Chr2:32072865-32073419 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230046603	pseudogene	Chr2:34145458-34146012 (+)
NOD/ShiLtJ	ENSMUSG00190042244	pseudogene	Chr2:32326348-32326902 (+)
NZO/HlLtJ	ENSMUSG00225049988	pseudogene	Chr2:41901931-41902485 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Glo1-ps
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000075391 (Evidence)
• NCBI Gene
  654354

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000075391	Ensembl Gene Model | MGI Sequence Detail	555	C57BL/6J
transcript	ENSMUST00000120770	Ensembl | MGI Sequence Detail	555	Not Applicable

Other
Accession IDs

MGI:6362695

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Glo1-ps:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr17469	Chr2:35230349-35230378 (+)	-57 bp