Gm13623 Pseudogene Detail

Summary

• Symbol
  Gm13623
• Name
  predicted gene 13623

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3649578
  NCBI Gene: 118568567
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:69596526-69597150 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 40.95 cM

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649578	pseudogene	Chr2:69592615-69601252 (+)
129S1/SvImJ	ENSMUSG00200037129	pseudogene	Chr2:66655896-66656520 (+)
A/J	ENSMUSG00195023104	pseudogene	Chr2:66806944-66807568 (+)
AKR/J	ENSMUSG00220040627	pseudogene	Chr2:66771809-66772433 (+)
BALB/cJ	ENSMUSG00180042497	pseudogene	Chr2:66752093-66752717 (+)
C3H/HeJ	ENSMUSG00175039707	pseudogene	Chr2:66871415-66872039 (+)
C57BL/6NJ	ENSMUSG00215029948	pseudogene	Chr2:66692297-66692921 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010471	pseudogene	Chr2:64293070-64293699 (+)
CAST/EiJ	ENSTCUG00005009230	pseudogene	Chr2:66171914-66172538 (+)
CBA/J	ENSMUSG00210037342	pseudogene	Chr2:66911700-66912324 (+)
DBA/2J	ENSMUSG00185042792	pseudogene	Chr2:66747245-66747869 (+)
FVB/NJ	ENSMUSG00205036206	pseudogene	Chr2:66220728-66221352 (+)
JF1/MsJ	ENSUMUG00000007438	pseudogene	Chr2:66411251-66411875 (+)
LP/J	ENSMUSG00230023597	pseudogene	Chr2:68552724-68553348 (+)
NOD/ShiLtJ	ENSMUSG00190042200	pseudogene	Chr2:66840340-66840964 (+)
NZO/HlLtJ	ENSMUSG00225015587	pseudogene	Chr2:76294979-76295603 (+)
PWK/PhJ	ENSLUMG00010033214	pseudogene	Chr2:66637276-66637900 (+)
SPRET/EiJ	ENSMSPG00010038259	pseudogene	Chr2:68040020-68040644 (+)
WSB/EiJ	ENSIUOG00005020742	pseudogene	Chr2:66885931-66886555 (+)

Homology

• Gene Tree
  Gm13623
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13623
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000083007 (Evidence)
• NCBI Gene
  118568567

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083007	Ensembl Gene Model | MGI Sequence Detail	625	C57BL/6J
transcript	ENSMUST00000118359	Ensembl | MGI Sequence Detail	625	Not Applicable
polypeptide	XP_036018681	RefSeq | MGI Sequence Detail	203	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm13623:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr514	Chr2:69596484-69596489 (+)	-39 bp