Gm11955 Pseudogene Detail

Summary

• Symbol
  Gm11955
• Name
  predicted gene 11955

• Feature Type
  pseudogene
• IDs
  MGI:3649568
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:4057755-4058224 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 2.88 cM

Strain
Comparison

• SNPs within 2kb
  18 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649568	pseudogene	Chr11:4057755-4058224 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010563	pseudogene	Chr11:1033122-1033591 (+)
A/J	MGP_AJ_G0010556	pseudogene	Chr11:1050951-1051420 (+)
AKR/J	MGP_AKRJ_G0010516	pseudogene	Chr11:1099858-1100327 (+)
BALB/cJ	MGP_BALBcJ_G0010530	pseudogene	Chr11:1018469-1018938 (+)
C3H/HeJ	MGP_C3HHeJ_G0010453	pseudogene	Chr11:998492-998961 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010799	pseudogene	Chr11:1119702-1120171 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009472	pseudogene	Chr11:928413-928883 (+)
CAST/EiJ	MGP_CASTEiJ_G0010278	pseudogene	Chr11:962085-962554 (+)
CBA/J	MGP_CBAJ_G0010425	pseudogene	Chr11:1349770-1350239 (+)
DBA/2J	MGP_DBA2J_G0010455	pseudogene	Chr11:951109-951578 (+)
FVB/NJ	MGP_FVBNJ_G0010473	pseudogene	Chr11:985022-985491 (+)
LP/J	MGP_LPJ_G0010545	pseudogene	Chr11:1143960-1144429 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010449	pseudogene	Chr11:1027757-1028226 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010777	pseudogene	Chr11:1100883-1101352 (+)
PWK/PhJ	MGP_PWKPhJ_G0010178	pseudogene	Chr11:951612-952081 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009992	pseudogene	Chr11:1051167-1051636 (+)
WSB/EiJ	MGP_WSBEiJ_G0010339	pseudogene	Chr11:975597-976066 (+)

Homology

• Gene Tree
  Gm11955
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000082364 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082364	Ensembl Gene Model | MGI Sequence Detail	470	C57BL/6J
transcript	ENSMUST00000119801	Ensembl | MGI Sequence Detail	470	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;