Gm11420 Pseudogene Detail

Summary

• Symbol
  Gm11420
• Name
  predicted gene 11420

• Feature Type
  pseudogene
• IDs
  MGI:3649517
  NCBI Gene: 115487744
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:82636630-82637031 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 50.20 cM

Strain
Comparison

• SNPs within 2kb
  152 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649517	pseudogene	Chr11:82635563-82637497 (-)
129S1/SvImJ	ENSMUSG00200051567	pseudogene	Chr11:79759464-79759865 (-)
A/J	ENSMUSG00195046855	pseudogene	Chr11:79625524-79625925 (-)
AKR/J	ENSMUSG00220049271	pseudogene	Chr11:79865061-79865462 (-)
BALB/cJ	ENSMUSG00180042527	pseudogene	Chr11:79825237-79825638 (-)
C3H/HeJ	ENSMUSG00175041860	pseudogene	Chr11:79795919-79796320 (-)
C57BL/6NJ	ENSMUSG00215041981	pseudogene	Chr11:79420561-79420962 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009664	pseudogene	Chr11:77747994-77748377 (-)
CAST/EiJ	ENSTCUG00005046044	pseudogene	Chr11:79331640-79332030 (-)
CBA/J	ENSMUSG00210046592	pseudogene	Chr11:79613625-79614026 (-)
DBA/2J	ENSMUSG00185041076	pseudogene	Chr11:79898019-79898420 (-)
FVB/NJ	ENSMUSG00205046802	pseudogene	Chr11:79701003-79701404 (-)
JF1/MsJ	ENSUMUG00000054428	pseudogene	Chr11:80271913-80272314 (-)
LP/J	ENSMUSG00230029319	pseudogene	Chr11:80914891-80915292 (-)
NOD/ShiLtJ	ENSMUSG00190048179	pseudogene	Chr11:79936924-79937325 (-)
NZO/HlLtJ	ENSMUSG00225039561	pseudogene	Chr11:83098308-83098709 (-)
PWK/PhJ	ENSLUMG00010025321	pseudogene	Chr11:79794147-79794548 (-)
SPRET/EiJ	ENSMSPG00010045150	pseudogene	Chr11:80219122-80219511 (-)
WSB/EiJ	ENSIUOG00005037307	pseudogene	Chr11:79767892-79768296 (-)

Homology

• Gene Tree
  Gm11420
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm11420
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000081828 (Evidence)
• NCBI Gene
  115487744

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081828	Ensembl Gene Model | MGI Sequence Detail	402	C57BL/6J
transcript	ENSMUST00000120047	Ensembl | MGI Sequence Detail	402	Not Applicable

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6