Gm12950 Pseudogene Detail

Summary

• Symbol
  Gm12950
• Name
  predicted gene 12950

• Feature Type
  pseudogene
• IDs
  MGI:3649504
  NCBI Gene: 631400
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:116305985-116306401 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 53.17 cM

Strain
Comparison

• SNPs within 2kb
  90 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649504	pseudogene	Chr4:116305985-116306401 (+)
129S1/SvImJ	ENSMUSG00200049759	pseudogene	Chr4:110202239-110202655 (+)
A/J	ENSMUSG00195047539	pseudogene	Chr4:111473700-111474116 (+)
AKR/J	ENSMUSG00220012640	pseudogene	Chr4:110814180-110814596 (+)
BALB/cJ	ENSMUSG00180046934	pseudogene	Chr4:109546270-109546686 (+)
C3H/HeJ	ENSMUSG00175041425	pseudogene	Chr4:110560739-110561155 (+)
C57BL/6NJ	ENSMUSG00215035587	pseudogene	Chr4:111630126-111630542 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022491	pseudogene	Chr4:110327290-110327705 (+)
CBA/J	ENSMUSG00210053313	pseudogene	Chr4:110174220-110174636 (+)
DBA/2J	ENSMUSG00185050785	pseudogene	Chr4:111699389-111699805 (+)
FVB/NJ	ENSMUSG00205043342	pseudogene	Chr4:109643798-109644214 (+)
JF1/MsJ	ENSUMUG00000048665	pseudogene	Chr4:111599165-111599581 (+)
LP/J	ENSMUSG00230046149	pseudogene	Chr4:115019539-115019955 (+)
NOD/ShiLtJ	ENSMUSG00190047531	pseudogene	Chr4:109542581-109542997 (+)
NZO/HlLtJ	ENSMUSG00225011617	pseudogene	Chr4:120506189-120506605 (+)
PWK/PhJ	ENSLUMG00010047998	pseudogene	Chr4:109000274-109000690 (+)
SPRET/EiJ	ENSMSPG00010029886	pseudogene	Chr4:111097065-111097649 (+)
WSB/EiJ	ENSIUOG00005043936	pseudogene	Chr4:109862005-109862421 (+)

Homology

• Gene Tree
  Gm12950
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm12950
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000082592 (Evidence)
• NCBI Gene
  631400

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082592	Ensembl Gene Model | MGI Sequence Detail	417	C57BL/6J
transcript	ENSMUST00000121683	Ensembl | MGI Sequence Detail	417	Not Applicable

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm12950:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr38516	Chr4:116305875-116305882 (+)	-106 bp