Gm12728 Pseudogene Detail

Summary

• Symbol
  Gm12728
• Name
  predicted gene 12728

• Feature Type
  pseudogene
• IDs
  MGI:3649486
  NCBI Gene: 269569
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:105651416-105651908 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 49.41 cM

Strain
Comparison

• SNPs within 2kb
  91 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649486	pseudogene	Chr4:105651373-105652108 (+)
129S1/SvImJ	ENSMUSG00200030847	pseudogene	Chr4:100696814-100697306 (+)
A/J	ENSMUSG00195008805	pseudogene	Chr4:101237450-101237942 (+)
AKR/J	ENSMUSG00220006767	pseudogene	Chr4:100656671-100657163 (+)
BALB/cJ	ENSMUSG00180033836	pseudogene	Chr4:100082867-100083359 (+)
C3H/HeJ	ENSMUSG00175015867	pseudogene	Chr4:101087448-101087940 (+)
C57BL/6NJ	ENSMUSG00215022654	pseudogene	Chr4:100982660-100983152 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0026229	protein coding gene	Chr4:97870285-97875054 (+)
CAST/EiJ	ENSTCUG00005007592	pseudogene	Chr4:100210896-100211387 (+)
CBA/J	ENSMUSG00210029257	pseudogene	Chr4:100720431-100720923 (+)
DBA/2J	ENSMUSG00185022540	pseudogene	Chr4:101428553-101429045 (+)
FVB/NJ	ENSMUSG00205015782	pseudogene	Chr4:99646436-99646928 (+)
JF1/MsJ	ENSUMUG00000043679	pseudogene	Chr4:101451164-101451656 (+)
LP/J	ENSMUSG00230009862	pseudogene	Chr4:104730290-104730782 (+)
NOD/ShiLtJ	ENSMUSG00190033141	pseudogene	Chr4:100105464-100105956 (+)
NZO/HlLtJ	ENSMUSG00225033007	pseudogene	Chr4:109847524-109848016 (+)
PWK/PhJ	ENSLUMG00010018604	pseudogene	Chr4:99172477-99172969 (+)
SPRET/EiJ	ENSMSPG00010008279	pseudogene	Chr4:101421014-101421506 (+)
WSB/EiJ	ENSIUOG00005003228	pseudogene	Chr4:100314282-100314774 (+)

Homology

• Gene Tree
  Gm12728
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm12728
• Find Mice (IMSR)
  4 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000083780 (Evidence)
• NCBI Gene
  269569

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083780	Ensembl Gene Model | MGI Sequence Detail	493	C57BL/6J
transcript	ENSMUST00000119740	Ensembl | MGI Sequence Detail	493	Not Applicable

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm12728:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr38167	Chr4:105651370-105651378 (+)	-42 bp