Gm12864 Pseudogene Detail

Summary

• Symbol
  Gm12864
• Name
  predicted gene 12864

• Feature Type
  pseudogene
• IDs
  MGI:3649273
  NCBI Gene: 666703
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr4:118844211-118845216 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 55.28 cM

Strain
Comparison

• SNPs within 2kb
  178 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649273	pseudogene	Chr4:118844193-118845423 (+)
129S1/SvImJ	ENSMUSG00200014677	pseudogene	Chr4:112748497-112749502 (+)
A/J	ENSMUSG00195034548	pseudogene	Chr4:113992539-113993543 (+)
AKR/J	ENSMUSG00220022153	pseudogene	Chr4:113355499-113356504 (+)
BALB/cJ	ENSMUSG00180045817	pseudogene	Chr4:112057137-112058142 (+)
C3H/HeJ	ENSMUSG00175025711	pseudogene	Chr4:113070369-113071374 (+)
C57BL/6NJ	ENSMUSG00215038731	pseudogene	Chr4:114181804-114182809 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011407	pseudogene	Chr4:109542526-109543531 (+)
CAST/EiJ	ENSTCUG00005046026	pseudogene	Chr4:112874623-112875627 (+)
CBA/J	ENSMUSG00210052626	pseudogene	Chr4:112676905-112677910 (+)
DBA/2J	ENSMUSG00185048669	pseudogene	Chr4:114227580-114228584 (+)
FVB/NJ	ENSMUSG00205027455	pseudogene	Chr4:112152774-112153779 (+)
JF1/MsJ	ENSUMUG00000028651	pseudogene	Chr4:114134675-114135680 (+)
LP/J	ENSMUSG00230046497	pseudogene	Chr4:117566288-117567293 (+)
NOD/ShiLtJ	ENSMUSG00190047760	pseudogene	Chr4:112059725-112060730 (+)
NZO/HlLtJ	ENSMUSG00225016946	pseudogene	Chr4:123112810-123113815 (+)
PWK/PhJ	ENSLUMG00010046823	pseudogene	Chr4:111552785-111553790 (+)
SPRET/EiJ	ENSMSPG00010043038	pseudogene	Chr4:113638797-113639794 (+)
WSB/EiJ	ENSIUOG00005048147	pseudogene	Chr4:112369374-112370379 (+)

Homology

• Gene Tree
  Gm12864
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm12864
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000082143 (Evidence)
• NCBI Gene
  666703

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082143	Ensembl Gene Model | MGI Sequence Detail	1006	C57BL/6J
transcript	ENSMUST00000122207	Ensembl | MGI Sequence Detail	1006	Not Applicable

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm12864:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr38691	Chr4:118844139-118844141 (+)	-71 bp
Tssr38692	Chr4:118844667-118844668 (+)	457 bp