Cyp4b1-ps2 Pseudogene Detail

Summary

• Symbol
  Cyp4b1-ps2
• Name
  cytochrome P450, family 4, subfamily b, polypeptide 1, pseudogene 2
• Synonyms
  Gm12839

• Feature Type
  pseudogene
• IDs
  MGI:3649236
  NCBI Gene: 631037
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:115439483-115440341 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 53.06 cM

Strain
Comparison

• SNPs within 2kb
  15 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649236	pseudogene	Chr4:115439235-115440341 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040371	pseudogene	Chr4:116459441-116460126 (-)
A/J	MGP_AJ_G0040347	pseudogene	Chr4:111976220-111977090 (-)
AKR/J	MGP_AKRJ_G0040276	pseudogene	Chr4:114424310-114426516 (-)
BALB/cJ	MGP_BALBcJ_G0040350	pseudogene	Chr4:112640303-112641281 (-)
C3H/HeJ	MGP_C3HHeJ_G0039975	pseudogene	Chr4:115936443-115937281 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040953	pseudogene	Chr4:120914288-120917005 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037346	pseudogene	Chr4:106116027-106116871 (-)
CAST/EiJ	MGP_CASTEiJ_G0039048	pseudogene	Chr4:113234697-113235500 (-)
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0040146	pseudogene	Chr4:112622089-112622961 (-)
FVB/NJ	MGP_FVBNJ_G0040101	pseudogene	Chr4:111120449-111178172 (-)
LP/J	MGP_LPJ_G0040192	pseudogene	Chr4:116630403-116670676 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0041044	pseudogene	Chr4:115550493-115551356 (-)
PWK/PhJ	MGP_PWKPhJ_G0038987	pseudogene	Chr9:7986346-7987175 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038441	pseudogene	Chr4:111823748-111824566 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Cyp4b1-ps2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Cyp4b1-ps2
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000083457 (Evidence)
• NCBI Gene
  631037

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083457	Ensembl Gene Model | MGI Sequence Detail	859	C57BL/6J
transcript	ENSMUST00000119563	Ensembl | MGI Sequence Detail	333	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 11

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:157972 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). Database Download. 2010;