Gm11470 Pseudogene Detail

Summary

• Symbol
  Gm11470
• Name
  predicted gene 11470

• Feature Type
  pseudogene
• IDs
  MGI:3649221
  NCBI Gene: 383774
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:166849051-166850959 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 87.22 cM

Strain
Comparison

• SNPs within 2kb
  42 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649221	pseudogene	Chr2:166848854-166850975 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011968	pseudogene	Chr2:172703388-172707770 (-)
A/J	MGP_AJ_G0011964	pseudogene	Chr2:165611830-165613511 (-)
AKR/J	MGP_AKRJ_G0011927	pseudogene	Chr2:170539370-170541569 (-)
BALB/cJ	MGP_BALBcJ_G0011941	pseudogene	Chr2:165958307-165960389 (-)
C3H/HeJ	MGP_C3HHeJ_G0011819	pseudogene	Chr2:170907633-170910679 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012236	pseudogene	Chr2:177719869-177725169 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010700	pseudogene	Chr2:158936621-158938108 (-)
CAST/EiJ	MGP_CASTEiJ_G0011602	pseudogene	Chr2:171366947-171368869 (-)
CBA/J	MGP_CBAJ_G0011793	pseudogene	Chr2:184240707-184242673 (-)
DBA/2J	MGP_DBA2J_G0011846	pseudogene	Chr2:164731831-164734108 (-)
FVB/NJ	MGP_FVBNJ_G0011853	pseudogene	Chr2:163234857-163238919 (-)
LP/J	MGP_LPJ_G0011913	pseudogene	Chr2:172728922-172730618 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011853	pseudogene	Chr2:187646264-187648302 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012241	pseudogene	Chr2:170446185-170449681 (-)
PWK/PhJ	MGP_PWKPhJ_G0011452	pseudogene	Chr2:164375080-164376599 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011266	pseudogene	Chr2:169391101-169392585 (-)
WSB/EiJ	MGP_WSBEiJ_G0011624	pseudogene	Chr2:171351512-171353204 (-)

Homology

• Gene Tree
  Gm11470
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082665 (Evidence)
• NCBI Gene
  383774

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082665	Ensembl Gene Model | MGI Sequence Detail	1909	C57BL/6J
transcript	ENSMUST00000118868	Ensembl | MGI Sequence Detail	1475	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;