Rpl9-ps1 Pseudogene Detail

Summary

• Symbol
  Rpl9-ps1
• Name
  ribosomal protein L9, pseudogene 1
• Synonyms
  Gm11436

• Feature Type
  pseudogene
• IDs
  MGI:3649210
  NCBI Gene: 194905
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:83535872-83536447 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 51.03 cM

Strain
Comparison

• SNPs within 2kb
  90 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649210	pseudogene	Chr11:83535777-83536467 (-)
129S1/SvImJ	ENSMUSG00200051891	pseudogene	Chr11:80663853-80664428 (-)
A/J	ENSMUSG00195047050	pseudogene	Chr11:80518298-80518873 (-)
AKR/J	ENSMUSG00220048496	pseudogene	Chr11:80733777-80734352 (-)
BALB/cJ	ENSMUSG00180042730	pseudogene	Chr11:80725589-80726164 (-)
C3H/HeJ	ENSMUSG00175040904	pseudogene	Chr11:80665331-80665906 (-)
C57BL/6NJ	ENSMUSG00215042407	pseudogene	Chr11:80309248-80309823 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046150	pseudogene	Chr11:80182805-80183381 (-)
CBA/J	ENSMUSG00210048214	pseudogene	Chr11:80482949-80483524 (-)
DBA/2J	ENSMUSG00185040544	pseudogene	Chr11:80818480-80819055 (-)
FVB/NJ	ENSMUSG00205047536	pseudogene	Chr11:80613178-80613753 (-)
JF1/MsJ	ENSUMUG00000028244	pseudogene	Chr11:81127460-81128036 (-)
LP/J	ENSMUSG00230029851	pseudogene	Chr11:81833071-81833646 (-)
NOD/ShiLtJ	ENSMUSG00190047137	pseudogene	Chr11:80825500-80826075 (-)
NZO/HlLtJ	ENSMUSG00225040035	pseudogene	Chr11:83959578-83960153 (-)
PWK/PhJ	ENSLUMG00010025472	pseudogene	Chr11:80642071-80642647 (-)
SPRET/EiJ	ENSMSPG00010043893	pseudogene	Chr11:81035271-81035847 (-)
WSB/EiJ	ENSIUOG00005037214	pseudogene	Chr11:80634421-80634996 (-)

Homology

• Gene Tree
  Rpl9-ps1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Rpl9-ps1
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081906 (Evidence)
• NCBI Gene
  194905

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081906	Ensembl Gene Model | MGI Sequence Detail	576	C57BL/6J
transcript	ENSMUST00000117199	Ensembl | MGI Sequence Detail	576	Not Applicable

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6