Gm7569 Pseudogene Detail

Summary

• Symbol
  Gm7569
• Name
  predicted gene 7569

• Feature Type
  pseudogene
• IDs
  MGI:3649158
  NCBI Gene: 665284
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr18:83506137-83506647 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 57.53 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649158	pseudogene	Chr18:83505979-83506960 (-)
129S1/SvImJ	ENSMUSG00200030263	pseudogene	Chr18:80740776-80741286 (-)
A/J	ENSMUSG00195004989	pseudogene	Chr18:80816030-80816540 (-)
AKR/J	ENSMUSG00220017586	pseudogene	Chr18:80731847-80732357 (-)
BALB/cJ	ENSMUSG00180014053	pseudogene	Chr18:81382716-81383226 (-)
C3H/HeJ	ENSMUSG00175012827	pseudogene	Chr18:80929867-80930377 (-)
C57BL/6NJ	ENSMUSG00215029464	pseudogene	Chr18:80299667-80300177 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005029482	pseudogene	Chr18:79825470-79825979 (-)
CBA/J	ENSMUSG00210036058	pseudogene	Chr18:80876179-80876689 (-)
DBA/2J	ENSMUSG00185011468	pseudogene	Chr18:80778628-80779138 (-)
FVB/NJ	ENSMUSG00205018293	pseudogene	Chr18:80185155-80185665 (-)
JF1/MsJ	ENSUMUG00000034468	pseudogene	Chr18:80645494-80646004 (-)
LP/J	ENSMUSG00230018236	pseudogene	Chr18:82829743-82830253 (-)
NOD/ShiLtJ	ENSMUSG00190024243	pseudogene	Chr18:80602344-80602854 (-)
NZO/HlLtJ	ENSMUSG00225023630	pseudogene	Chr18:82706387-82706897 (-)
PWK/PhJ	ENSLUMG00010006996	pseudogene	Chr18:81044630-81045140 (-)
SPRET/EiJ	ENSMSPG00010009026	pseudogene	Chr18:81408015-81408525 (-)
WSB/EiJ	ENSIUOG00005008118	pseudogene	Chr18:80231055-80231565 (-)

Homology

• Gene Tree
  Gm7569
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Transposon induced
  1
• Genomic Mutations
  1 involving Gm7569
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000118156 (Evidence)
• NCBI Gene
  665284

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118156	Ensembl Gene Model | MGI Sequence Detail	511	C57BL/6J
transcript	ENSMUST00000236581	Ensembl | MGI Sequence Detail	511	Not Applicable

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:175597 Overbeek PA, Direct Data Submission for Overbeek Lentiviral Transgenic Lines. MGI Direct Data Submission. 2011;

TSS for Gm7569:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr154101	Chr18:83506956-83506961 (-)	-312 bp