Gm5050 Pseudogene Detail

Summary

• Symbol
  Gm5050
• Name
  predicted gene 5050

• Feature Type
  pseudogene
• IDs
  MGI:3649091
  NCBI Gene: 269718
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:136239866-136240640 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 75.92 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649091	pseudogene	Chr5:136239820-136240673 (-)
129S1/SvImJ	ENSMUSG00200048945	pseudogene	Chr5:130027245-130028019 (-)
A/J	ENSMUSG00195051538	pseudogene	Chr5:129528665-129529439 (-)
AKR/J	ENSMUSG00220050175	pseudogene	Chr5:129019670-129020444 (-)
BALB/cJ	ENSMUSG00180045867	pseudogene	Chr5:129631685-129632459 (-)
C3H/HeJ	ENSMUSG00175040175	pseudogene	Chr5:131559384-131560158 (-)
C57BL/6NJ	ENSMUSG00215050015	pseudogene	Chr5:129682425-129683199 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010698	pseudogene	Chr5:128917359-128918133 (-)
CBA/J	ENSMUSG00210008337	pseudogene	Chr5:130377022-130377796 (-)
DBA/2J	ENSMUSG00185055692	pseudogene	Chr5:133392317-133393091 (-)
FVB/NJ	ENSMUSG00205050115	pseudogene	Chr5:129276663-129277437 (-)
JF1/MsJ	ENSUMUG00000054447	pseudogene	Chr5:136290909-136291686 (-)
LP/J	ENSMUSG00230049668	pseudogene	Chr5:137505824-137506598 (-)
NOD/ShiLtJ	ENSMUSG00190047028	pseudogene	Chr5:129331658-129332432 (-)
NZO/HlLtJ	ENSMUSG00225023829	pseudogene	Chr5:145187454-145188228 (-)
PWK/PhJ	ENSLUMG00010018608	pseudogene	Chr5:128150971-128151745 (-)
SPRET/EiJ	ENSMSPG00010040032	pseudogene	Chr5:131547306-131548081 (-)
WSB/EiJ	ENSIUOG00005035399	pseudogene	Chr5:131984669-131985443 (-)

Homology

• Gene Tree
  Gm5050
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000106243 (Evidence)
• NCBI Gene
  269718

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106243	Ensembl Gene Model | MGI Sequence Detail	775	C57BL/6J
transcript	ENSMUST00000197164	Ensembl | MGI Sequence Detail	775	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;