Gm5064 Pseudogene Detail

Summary

• Symbol
  Gm5064
• Name
  predicted gene 5064
• Synonyms
  EG666003

• Feature Type
  pseudogene
• IDs
  MGI:3649060
  NCBI Gene: 271505
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:28320163-28321870 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 16.33 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  230 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649060	pseudogene	Chr18:28319962-28321880 (-)
129S1/SvImJ	ENSMUSG00200016461	pseudogene	Chr18:25331623-25333330 (-)
A/J	ENSMUSG00195002465	pseudogene	Chr18:25486132-25487839 (-)
AKR/J	ENSMUSG00220011732	pseudogene	Chr18:25483437-25485144 (-)
BALB/cJ	ENSMUSG00180003511	pseudogene	Chr18:25933169-25934876 (-)
C3H/HeJ	ENSMUSG00175024194	pseudogene	Chr18:25458085-25459792 (-)
C57BL/6NJ	ENSMUSG00215023034	pseudogene	Chr18:25178263-25179970 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016543	pseudogene	Chr18:25125382-25127096 (-)
CBA/J	ENSMUSG00210016101	pseudogene	Chr18:25476653-25478360 (-)
DBA/2J	ENSMUSG00185022838	pseudogene	Chr18:25424861-25426568 (-)
FVB/NJ	ENSMUSG00205023564	pseudogene	Chr18:25166135-25167842 (-)
JF1/MsJ	ENSUMUG00000026516	pseudogene	Chr18:25525868-25527581 (-)
LP/J	ENSMUSG00230006088	pseudogene	Chr18:27520235-27521942 (-)
NOD/ShiLtJ	ENSMUSG00190007054	pseudogene	Chr18:25236605-25238312 (-)
NZO/HlLtJ	ENSMUSG00225025562	pseudogene	Chr18:27476795-27478502 (-)
PWK/PhJ	ENSLUMG00010003740	pseudogene	Chr18:25689695-25691408 (-)
SPRET/EiJ	ENSMSPG00010023093	pseudogene	Chr18:25660713-25662433 (-)
WSB/EiJ	ENSIUOG00005002766	pseudogene	Chr18:25273379-25275086 (-)

Homology

• Gene Tree
  Gm5064
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000117416 (Evidence)
• NCBI Gene
  271505

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117416	Ensembl Gene Model | MGI Sequence Detail	1708	C57BL/6J
transcript	ENSMUST00000234906	Ensembl | MGI Sequence Detail	1708	Not Applicable

Other
Accession IDs

MGI:3648253

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;