Gm6140 Pseudogene Detail

Summary

• Symbol
  Gm6140
• Name
  predicted gene 6140

• Feature Type
  pseudogene
• IDs
  MGI:3649056
  NCBI Gene: 620283
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:4955326-4956291 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 1.96 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  148 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649056	pseudogene	Chr3:4955326-4956291 (-)
129S1/SvImJ	ENSMUSG00200001018	pseudogene	Chr3:1641705-1642670 (-)
A/J	ENSMUSG00195001219	pseudogene	Chr3:1975882-1976847 (-)
AKR/J	ENSMUSG00220017100	pseudogene	Chr3:1948456-1949421 (-)
BALB/cJ	ENSMUSG00180007273	pseudogene	Chr3:1968201-1969166 (-)
C3H/HeJ	ENSMUSG00175005086	pseudogene	Chr3:1985786-1986751 (-)
C57BL/6NJ	ENSMUSG00215005417	pseudogene	Chr3:1955956-1956921 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000264	pseudogene	Chr3:2008871-2009837 (-)
CBA/J	ENSMUSG00210000917	pseudogene	Chr3:1966075-1967040 (-)
DBA/2J	ENSMUSG00185000572	pseudogene	Chr3:1959348-1960313 (-)
FVB/NJ	ENSMUSG00205006091	pseudogene	Chr3:1787284-1788249 (-)
JF1/MsJ	ENSUMUG00000011619	pseudogene	Chr3:1908176-1909141 (-)
LP/J	ENSMUSG00230000176	pseudogene	Chr3:3881773-3882738 (-)
NOD/ShiLtJ	ENSMUSG00190022952	pseudogene	Chr3:1959882-1960847 (-)
NZO/HlLtJ	ENSMUSG00225001676	pseudogene	Chr3:6420723-6421688 (-)
PWK/PhJ	ENSLUMG00010008368	pseudogene	Chr3:1933736-1934701 (-)
SPRET/EiJ	ENSMSPG00010000120	pseudogene	Chr3:1774058-1775023 (-)
WSB/EiJ	ENSIUOG00005000754	pseudogene	Chr3:2009024-2009989 (-)

Homology

• Gene Tree
  Gm6140
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000104141 (Evidence)
• NCBI Gene
  620283

Representative Sequences			Length	Strain/Species
genomic	620283	NCBI Gene Model | MGI Sequence Detail	966	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm6140:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr32522	Chr3:4956375-4956386 (-)	-90 bp