Gm5046 Pseudogene Detail

Summary

• Symbol
  Gm5046
• Name
  predicted gene 5046

• Feature Type
  pseudogene
• IDs
  MGI:3649048
  NCBI Gene: 268812
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:64887003-64887613 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 29.03 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  157 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649048	pseudogene	Chr15:64886990-64888777 (+)
129S1/SvImJ	ENSMUSG00200019661	pseudogene	Chr15:61923923-61924533 (+)
A/J	ENSMUSG00195028625	pseudogene	Chr15:62046762-62047372 (+)
AKR/J	ENSMUSG00220022091	pseudogene	Chr15:61895733-61896343 (+)
BALB/cJ	ENSMUSG00180023899	pseudogene	Chr15:61859827-61860437 (+)
C3H/HeJ	ENSMUSG00175005363	pseudogene	Chr15:62187738-62188348 (+)
C57BL/6NJ	ENSMUSG00215006152	pseudogene	Chr15:61874789-61875399 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010029	pseudogene	Chr15:58902510-58902813 (+)
CAST/EiJ	ENSTCUG00005020341	pseudogene	Chr15:61669759-61670369 (+)
CBA/J	ENSMUSG00210025268	pseudogene	Chr15:61982811-61983421 (+)
DBA/2J	ENSMUSG00185025239	pseudogene	Chr15:61914956-61915566 (+)
FVB/NJ	ENSMUSG00205010791	pseudogene	Chr15:61642234-61642844 (+)
JF1/MsJ	ENSUMUG00000019096	pseudogene	Chr15:61645050-61645660 (+)
LP/J	ENSMUSG00230024985	pseudogene	Chr15:65250527-65251137 (+)
NOD/ShiLtJ	ENSMUSG00190004569	pseudogene	Chr15:61963283-61963893 (+)
NZO/HlLtJ	ENSMUSG00225027496	pseudogene	Chr15:65533078-65533688 (+)
PWK/PhJ	ENSLUMG00010011251	pseudogene	Chr15:61960810-61961420 (+)
SPRET/EiJ	ENSMSPG00010004512	pseudogene	Chr15:63301471-63302081 (+)
WSB/EiJ	ENSIUOG00005021188	pseudogene	Chr15:61955947-61956557 (+)

Homology

• Gene Tree
  Gm5046
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  24 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  3
• Radiation induced
  2
• Genomic Mutations
  5 involving Gm5046
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000072541 (Evidence)
• NCBI Gene
  268812

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000072541	Ensembl Gene Model | MGI Sequence Detail	611	C57BL/6J
transcript	ENSMUST00000100608	Ensembl | MGI Sequence Detail	611	Not Applicable

References

• Summaries
  All 29

  Diseases 1

  Phenotypes 24
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)