Gm5921 Pseudogene Detail

Summary

• Symbol
  Gm5921
• Name
  predicted gene 5921

• Feature Type
  pseudogene
• IDs
  MGI:3648968
  NCBI Gene: 546164
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:115266768-115267649 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 67.86 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  21

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648968	pseudogene	Chr9:115266726-115267674 (-)
129S1/SvImJ	ENSMUSG00200030955	pseudogene	Chr9:112367569-112368450 (-)
A/J	ENSMUSG00195029149	pseudogene	Chr17:75809949-75810830 (+)
A/J	ENSMUSG00195044949	pseudogene	Chr9:111553403-111554284 (-)
AKR/J	ENSMUSG00220020424	pseudogene	Chr9:112015443-112016324 (-)
BALB/cJ	ENSMUSG00180030790	pseudogene	Chr9:112091060-112091941 (-)
C3H/HeJ	ENSMUSG00175020263	pseudogene	Chr9:112313013-112313894 (-)
C57BL/6NJ	ENSMUSG00215035715	pseudogene	Chr9:112212550-112213431 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035421	pseudogene	ChrX:135545512-135546393 (+)
CAST/EiJ	ENSTCUG00005016893	pseudogene	Chr9:111987368-111988249 (-)
CBA/J	ENSMUSG00210043928	pseudogene	Chr9:112054877-112055758 (-)
DBA/2J	ENSMUSG00185017668	pseudogene	Chr9:112391620-112392501 (-)
FVB/NJ	ENSMUSG00205033269	pseudogene	Chr9:112218868-112219749 (-)
JF1/MsJ	ENSUMUG00000051157	pseudogene	Chr9:112226241-112227122 (-)
JF1/MsJ	ENSUMUG00000055390	pseudogene	Chr11:113669923-113670792 (+)
JF1/MsJ	ENSUMUG00000055230	pseudogene	Chr16:10513109-10513995 (-)
LP/J	ENSMUSG00230038639	pseudogene	Chr9:112496204-112497085 (-)
NOD/ShiLtJ	ENSMUSG00190015559	pseudogene	Chr9:111969657-111970538 (-)
NZO/HlLtJ	ENSMUSG00225024201	pseudogene	Chr9:112774806-112775687 (-)
PWK/PhJ	ENSLUMG00010038285	pseudogene	Chr9:112152154-112153035 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005021678	pseudogene	Chr9:111438168-111439049 (-)

Homology

• Gene Tree
  Gm5921
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000074034 (Evidence)
• NCBI Gene
  546164

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000074034	Ensembl Gene Model | MGI Sequence Detail	882	C57BL/6J
transcript	ENSMUST00000075898	Ensembl | MGI Sequence Detail	882	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm5921:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr91906	Chr9:115267673-115267674 (-)	-25 bp