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Gm5554 Pseudogene Detail
Summary
  • Symbol
    Gm5554
  • Name
    predicted gene 5554
Location &
Maps
more
  • Sequence Map
    Chr5:43120747-43121952 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 23.46 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    189 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648967
 pseudogene Chr5:43120442-43122249 (-)
129S1/SvImJ ENSMUSG00200033036
 pseudogene Chr5:38618403-38619608 (-)
A/J ENSMUSG00195030209
 pseudogene Chr5:38023741-38024946 (-)
AKR/J ENSMUSG00220002602
 pseudogene Chr5:38064902-38066107 (-)
BALB/cJ ENSMUSG00180025888
 pseudogene Chr5:37866197-37867402 (-)
C3H/HeJ ENSMUSG00175020941
 pseudogene Chr5:39819474-39820679 (-)
C57BL/6NJ ENSMUSG00215006332
 pseudogene Chr5:38578201-38579406 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005025304
 pseudogene Chr5:37969309-37970512 (-)
CBA/J ENSMUSG00210005486
 pseudogene Chr5:38784602-38785807 (-)
DBA/2J ENSMUSG00185001621
 pseudogene Chr5:40676413-40677618 (-)
FVB/NJ ENSMUSG00205021615
 pseudogene Chr5:37595777-37596982 (-)
JF1/MsJ ENSUMUG00000002565
 pseudogene Chr5:45271136-45272339 (-)
LP/J ENSMUSG00230002927
 pseudogene Chr5:45318403-45319608 (-)
NOD/ShiLtJ ENSMUSG00190003241
 pseudogene Chr5:37859337-37860542 (-)
NZO/HlLtJ ENSMUSG00225017784
 pseudogene Chr5:50478257-50479462 (-)
PWK/PhJ ENSLUMG00010023536
 pseudogene Chr5:37929204-37930407 (-)
SPRET/EiJ ENSMSPG00010039225
 pseudogene Chr5:39197889-39199092 (-)
WSB/EiJ ENSIUOG00005019023
 pseudogene Chr5:40755398-40756603 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (ENU)
    1
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    5 involving Gm5554
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106622 Ensembl Gene Model | MGI Sequence Detail 1206 C57BL/6J ±  kb
transcript ENSMUST00000199726 Ensembl | MGI Sequence Detail 1206 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 11
    Diseases 1
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:100332 Wilson L, et al., Random mutagenesis of proximal mouse chromosome 5 uncovers predominantly embryonic lethal mutations. Genome Res. 2005 Aug;15(8):1095-105
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory