Gm8953 Gene Detail

Summary

• Symbol
  Gm8953
• Name
  predicted gene 8953

• Feature Type
  lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3648962
  NCBI Gene: 668059
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:12404647-12405342 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 3.97 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  175 from dbSNP Build 142
• Strain Annotations
  22

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648962	lncRNA gene	Chr5:12404647-12405754 (-)
129S1/SvImJ	ENSMUSG00200003309	lncRNA gene	Chr5:8689796-8690886 (-)
A/J	ENSMUSG00195012314	lncRNA gene	Chr5:8277686-8278776 (-)
AKR/J	ENSMUSG00220002137	lncRNA gene	Chr5:8375074-8376164 (-)
BALB/cJ	ENSMUSG00180017340	lncRNA gene	Chr5:8075936-8077026 (-)
C3H/HeJ	ENSMUSG00175028441	lncRNA gene	Chr5:7949657-7950747 (-)
C57BL/6NJ	ENSMUSG00215025160	lncRNA gene	Chr5:8763972-8765062 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001871	lncRNA gene	Chr5:8240531-8241622 (-)
CBA/J	ENSMUSG00210002804	lncRNA gene	Chr5:8822808-8823898 (-)
DBA/2J	ENSMUSG00185030557	lncRNA gene	Chr5:9403872-9404962 (-)
FVB/NJ	ENSMUSG00205009015	lncRNA gene	Chr5:7994193-7995283 (-)
JF1/MsJ	ENSUMUG00000003607	lncRNA gene	Chr5:9776120-9777211 (-)
LP/J	ENSMUSG00230003677	lncRNA gene	Chr5:13387688-13388778 (-)
NOD/ShiLtJ	ENSMUSG00190013133	lncRNA gene	Chr5:7908502-7909592 (+)
NZO/HlLtJ	ENSMUSG00225009299	lncRNA gene	Chr5:17063856-17064946 (-)
PWK/PhJ	ENSLUMG00010019702	lncRNA gene	Chr5:8450073-8451164 (-)
SPRET/EiJ	ENSMSPG00010007138	lncRNA gene	Chr13:116408286-116409385 (+)
SPRET/EiJ	ENSMSPG00010005096	lncRNA gene	Chr5:8547914-8549134 (-)
SPRET/EiJ	ENSMSPG00010006480	lncRNA gene	Chr5:146775601-146776696 (+)
SPRET/EiJ	ENSMSPG00010012053	lncRNA gene	Chr12:115855084-115856179 (+)
SPRET/EiJ	ENSMSPG00010007115	lncRNA gene	Chr5:146758186-146759281 (+)
WSB/EiJ	ENSIUOG00005027422	lncRNA gene	Chr5:8479114-8480204 (-)

Homology

• Gene Tree
  Gm8953
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  2

• Ensembl
  ENSMUSG00000104941 (Evidence)
• NCBI Gene
  668059

Representative Sequences			Length	Strain/Species
genomic	668059	NCBI Gene Model | MGI Sequence Detail	696	C57BL/6J
transcript	AA289585	GenBank | ENA | DDBJ | MGI Sequence Detail	373	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 8
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm8953:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr50122	Chr5:12405738-12405747 (-)	-401 bp