Gm8950 Pseudogene Detail

Summary

• Symbol
  Gm8950
• Name
  predicted gene 8950

• Feature Type
  pseudogene
• IDs
  MGI:3648955
  NCBI Gene: 668053
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:23163375-23164089 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 10.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  45

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648955	pseudogene	Chr6:23163367-23164090 (-)
129S1/SvImJ	ENSMUSG00200035214	pseudogene	Chr6:20220841-20220971 (-)
A/J	ENSMUSG00195009482	pseudogene	Chr6:20187003-20187717 (-)
AKR/J	ENSMUSG00220001090	pseudogene	Chr6:19755084-19755798 (-)
BALB/cJ	ENSMUSG00180023835	pseudogene	Chr6:20318066-20318780 (-)
C3H/HeJ	ENSMUSG00175019402	pseudogene	Chr6:20132497-20132627 (-)
C57BL/6NJ	ENSMUSG00215025874	pseudogene	Chr6:20225365-20226079 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022719	pseudogene	Chr6:19881591-19882305 (-)
CAST/EiJ	ENSTCUG00005022136	pseudogene	Chr6:19896300-19897014 (-)
CAST/EiJ	ENSTCUG00005022727	pseudogene	Chr6:19888952-19889666 (-)
CAST/EiJ	ENSTCUG00005022735	pseudogene	Chr6:19903660-19904374 (-)
CBA/J	ENSMUSG00210005031	pseudogene	Chr6:20171279-20171409 (-)
DBA/2J	ENSMUSG00185022245	pseudogene	Chr6:20268860-20269574 (-)
FVB/NJ	ENSMUSG00205038713	pseudogene	Chr6:20204231-20204945 (-)
FVB/NJ	ENSMUSG00205038751	pseudogene	Chr6:20211552-20212266 (-)
FVB/NJ	ENSMUSG00205036338	pseudogene	Chr6:20218873-20219587 (-)
JF1/MsJ	ENSUMUG00000016742	pseudogene	Chr6:47337340-47338028 (+)
JF1/MsJ	ENSUMUG00000041579	pseudogene	Chr6:20049761-20050475 (-)
JF1/MsJ	ENSUMUG00000043523	pseudogene	Chr6:20042430-20043144 (-)
JF1/MsJ	ENSUMUG00000043483	pseudogene	Chr6:20035092-20035806 (-)
JF1/MsJ	ENSUMUG00000016755	pseudogene	Chr6:47352813-47353501 (+)
JF1/MsJ	ENSUMUG00000043431	pseudogene	Chr6:20025006-20028475 (-)
JF1/MsJ	ENSUMUG00000016730	pseudogene	Chr6:47329940-47330628 (+)
JF1/MsJ	ENSUMUG00000016717	pseudogene	Chr6:47322452-47323140 (+)
JF1/MsJ	ENSUMUG00000016765	pseudogene	Chr6:47360761-47361449 (+)
LP/J	ENSMUSG00230031164	pseudogene	Chr6:21238087-21238719 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225014870	pseudogene	Chr6:23173686-23174400 (-)
NZO/HlLtJ	ENSMUSG00225014865	pseudogene	Chr6:23204926-23205640 (-)
NZO/HlLtJ	ENSMUSG00225014794	pseudogene	Chr6:23190266-23190980 (-)
NZO/HlLtJ	ENSMUSG00225014861	pseudogene	Chr6:23197587-23198301 (-)
NZO/HlLtJ	ENSMUSG00225014871	pseudogene	Chr6:23181006-23181720 (-)
PWK/PhJ	ENSLUMG00010023829	pseudogene	Chr6:46984652-46985340 (+)
PWK/PhJ	ENSLUMG00010023898	pseudogene	Chr6:47022177-47022864 (+)
PWK/PhJ	ENSLUMG00010020201	pseudogene	Chr6:19752531-19753245 (-)
PWK/PhJ	ENSLUMG00010023940	pseudogene	Chr6:47044708-47045396 (+)
PWK/PhJ	ENSLUMG00010023925	pseudogene	Chr6:47037217-47037905 (+)
PWK/PhJ	ENSLUMG00010023875	pseudogene	Chr6:46999726-47000414 (+)
PWK/PhJ	ENSLUMG00010020634	pseudogene	Chr6:19759855-19760569 (-)
PWK/PhJ	ENSLUMG00010023841	pseudogene	Chr6:46992199-46992888 (+)
PWK/PhJ	ENSLUMG00010023886	pseudogene	Chr6:47014713-47015400 (+)
PWK/PhJ	ENSLUMG00010023911	pseudogene	Chr6:47029676-47030362 (+)
SPRET/EiJ	ENSMSPG00010023437	pseudogene	Chr6:20109741-20110455 (-)
WSB/EiJ	ENSIUOG00005036555	pseudogene	Chr6:20294830-20295544 (-)
WSB/EiJ	ENSIUOG00005036595	pseudogene	Chr6:20280185-20280899 (-)
WSB/EiJ	ENSIUOG00005036166	pseudogene	Chr6:20287508-20288222 (-)

Homology

• Gene Tree
  Gm8950
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  50
• RefSeq
  2

• Ensembl
  ENSMUSG00000117101 (Evidence)
• NCBI Gene
  668053

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117101	Ensembl Gene Model | MGI Sequence Detail	715	C57BL/6J
transcript	ENSMUST00000232696	Ensembl | MGI Sequence Detail	715	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;