Gm5814 Pseudogene Detail

Summary

• Symbol
  Gm5814
• Name
  predicted pseudogene 5814

• Feature Type
  pseudogene
• IDs
  MGI:3648910
  NCBI Gene: 545208
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr17:47721288-47721662 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 23.11 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648910	pseudogene	Chr17:47721173-47722707 (+)
129S1/SvImJ	ENSMUSG00200029024	pseudogene	Chr17:42923902-42924284 (+)
A/J	ENSMUSG00195022683	pseudogene	Chr17:44424866-44425240 (+)
AKR/J	ENSMUSG00220037471	pseudogene	Chr17:43418060-43418410 (+)
BALB/cJ	ENSMUSG00180025107	pseudogene	Chr17:44174417-44174767 (+)
C3H/HeJ	ENSMUSG00175016700	pseudogene	Chr17:43488842-43489216 (+)
C57BL/6NJ	ENSMUSG00215037317	pseudogene	Chr17:43044246-43044620 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0027163	protein coding gene	Chr5:31700268-31700645 (-)
CAST/EiJ	ENSTCUG00005025960	pseudogene	Chr17:44200749-44201123 (+)
CBA/J	ENSMUSG00210037981	pseudogene	Chr17:43238478-43238852 (+)
DBA/2J	ENSMUSG00185029642	pseudogene	Chr17:46137442-46137816 (+)
FVB/NJ	ENSMUSG00205052890	pseudogene	Chr17:43711207-43711557 (+)
JF1/MsJ	ENSUMUG00000036677	pseudogene	Chr17:45768579-45768953 (+)
LP/J	ENSMUSG00230041810	pseudogene	Chr17:47035756-47036106 (+)
NOD/ShiLtJ	ENSMUSG00190017898	pseudogene	Chr17:43132623-43132997 (+)
NZO/HlLtJ	ENSMUSG00225043905	pseudogene	Chr17:49290241-49290591 (+)
PWK/PhJ	ENSLUMG00010037397	pseudogene	Chr17:42991808-42992182 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005027903	pseudogene	Chr17:44089468-44089850 (+)

Homology

• Gene Tree
  Gm5814
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000096361 (Evidence)
• NCBI Gene
  545208

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000096361	Ensembl Gene Model | MGI Sequence Detail	375	C57BL/6J
transcript	ENSMUST00000177586	Ensembl | MGI Sequence Detail	375	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm5814:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr144908	Chr17:47721172-47721178 (+)	-113 bp
Tssr144909	Chr17:47721432-47721474 (+)	165 bp